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鲍曼不动杆菌的转化:电穿孔法。

Transformation of Acinetobacter baumannii: Electroporation.

作者信息

Thompson Mitchell G, Yildirim Süleyman

机构信息

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA.

Department of Medical Microbiology, International School of Medicine, Istanbul Medipol University, Istanbul, Turkey.

出版信息

Methods Mol Biol. 2019;1946:69-74. doi: 10.1007/978-1-4939-9118-1_7.

Abstract

Although the pan and the core genome of Acinetobacter baumannii and its essential genes are relatively well characterized, functional characterization of these genes has not paralleled the genome-level studies. However, recently developed genetic tools and optimized protocols are poised to accelerate genetic manipulation of A. baumannii. Transferring exogenous DNA into the cytosol of bacteria cells is a critical step in genetic characterizations. Conjugation is restricted to the transfer of DNA from one bacterial cell to another, and only a portion of A. baumannii clinical isolates are naturally competent. Electroporation, which is thought to transiently create aqueous pores in the membrane, is a preferred method in transferring exogenous DNA as it does not have such limitations. Several factors contribute to efficiency of electroporation and often need to be empirically optimized to maximize efficiency of this procedure. Here we provide an optimized electroporation protocol and guidance for electroporation of clinical MDR isolates of A. baumannii.

摘要

虽然鲍曼不动杆菌的泛基因组、核心基因组及其必需基因已得到较好的表征,但这些基因的功能表征尚未与基因组水平的研究同步。然而,最近开发的遗传工具和优化方案有望加速鲍曼不动杆菌的基因操作。将外源DNA导入细菌细胞的细胞质是基因表征中的关键步骤。接合作用仅限于DNA从一个细菌细胞转移到另一个细菌细胞,并且只有一部分鲍曼不动杆菌临床分离株具有天然感受态。电穿孔被认为可在膜上瞬时形成水孔,由于没有此类限制,它是转移外源DNA的首选方法。有几个因素会影响电穿孔效率,通常需要根据经验进行优化以最大化该程序的效率。在此,我们提供了一种优化的电穿孔方案以及针对鲍曼不动杆菌临床多重耐药分离株进行电穿孔的指导。

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