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与免疫抑制剂药代动力学和不良反应相关的遗传变异在 DeKAF 基因组全基因组关联研究中的分析。

Genetic Variants Associated With Immunosuppressant Pharmacokinetics and Adverse Effects in the DeKAF Genomics Genome-wide Association Studies.

机构信息

Department of Experimental and Clinical Pharmacology, College of Pharmacy, University of Minnesota, Minneapolis, MN.

Department of Biostatistics, University of Minnesota, Minneapolis, MN.

出版信息

Transplantation. 2019 Jun;103(6):1131-1139. doi: 10.1097/TP.0000000000002625.

DOI:10.1097/TP.0000000000002625
PMID:30801552
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6597284/
Abstract

BACKGROUND

The immunosuppressants tacrolimus and mycophenolate are important components to the success of organ transplantation, but are also associated with adverse effects, such as nephrotoxicity, anemia, leukopenia, and new-onset diabetes after transplantation. In this report, we attempted to identify genetic variants which are associated with these adverse outcomes.

METHODS

We performed a genome-wide association study, using a genotyping array tailored specifically for transplantation outcomes containing 722 147 single nucleotide polymorphisms, and 2 cohorts of kidney allograft recipients-a discovery cohort and a confirmation cohort-to identify and then confirm genetic variants associated with immunosuppressant pharmacokinetics and adverse outcomes.

RESULTS

Several genetic variants were found to be associated with tacrolimus trough concentrations. We did not confirm variants associated with the other phenotypes tested although several suggestive variants were identified.

CONCLUSIONS

These results show that adverse effects associated with tacrolimus and mycophenolate are complex, and recipient risk is not determined by a few genetic variants with large effects with but most likely are due to many variants, each with small effect sizes, and clinical factors.

摘要

背景

免疫抑制剂他克莫司和霉酚酸酯是器官移植成功的重要组成部分,但也与不良反应相关,如肾毒性、贫血、白细胞减少和移植后新发糖尿病。在本报告中,我们试图确定与这些不良反应相关的遗传变异。

方法

我们进行了一项全基因组关联研究,使用专门针对移植结局的基因分型阵列,该阵列包含 722077 个单核苷酸多态性,以及 2 个肾移植受者队列——一个发现队列和一个验证队列,以识别并验证与免疫抑制剂药代动力学和不良反应相关的遗传变异。

结果

发现了几个与他克莫司谷浓度相关的遗传变异。虽然鉴定出了一些提示性变异,但我们没有确认与其他测试表型相关的变异。

结论

这些结果表明,与他克莫司和霉酚酸酯相关的不良反应是复杂的,受者的风险不是由少数具有较大影响的遗传变异决定的,而是可能由许多具有较小效应的遗传变异和临床因素决定的。

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Genetic Variants Associated With Immunosuppressant Pharmacokinetics and Adverse Effects in the DeKAF Genomics Genome-wide Association Studies.与免疫抑制剂药代动力学和不良反应相关的遗传变异在 DeKAF 基因组全基因组关联研究中的分析。
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本文引用的文献

1
Analyses of the short- and long-term graft survival after kidney transplantation in Europe between 1986 and 2015.1986 年至 2015 年欧洲肾移植后的短期和长期移植物存活率分析。
Kidney Int. 2018 Nov;94(5):964-973. doi: 10.1016/j.kint.2018.05.018. Epub 2018 Jul 24.
2
Genetic immune and inflammatory markers associated with diabetes in solid organ transplant recipients.与实体器官移植受者糖尿病相关的遗传免疫和炎症标志物。
Am J Transplant. 2019 Jan;19(1):238-246. doi: 10.1111/ajt.14971. Epub 2018 Jul 13.
3
CYP3A4 and GCK genetic polymorphisms are the risk factors of tacrolimus-induced new-onset diabetes after transplantation in renal transplant recipients.细胞色素P450 3A4(CYP3A4)和葡萄糖激酶(GCK)基因多态性是肾移植受者中他克莫司诱导移植后新发糖尿病的危险因素。
Eur J Clin Pharmacol. 2018 Jun;74(6):723-729. doi: 10.1007/s00228-018-2442-4. Epub 2018 Mar 15.
4
Pharmacogenetics of post-transplant diabetes mellitus in children with renal transplantation treated with tacrolimus.肾移植术后他克莫司治疗儿童移植后糖尿病的药物遗传学研究。
Pediatr Nephrol. 2018 Jun;33(6):1045-1055. doi: 10.1007/s00467-017-3881-3. Epub 2018 Feb 4.
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Long- and short-term outcomes in renal allografts with deceased donors: A large recipient and donor genome-wide association study.用已故供体的肾移植的长期和短期结果:一项大型受者和供者全基因组关联研究。
Am J Transplant. 2018 Jun;18(6):1370-1379. doi: 10.1111/ajt.14594. Epub 2018 Feb 1.
6
Attempted validation of 44 reported SNPs associated with tacrolimus troughs in a cohort of kidney allograft recipients.在一组肾移植受者中对44个报告的与他克莫司谷浓度相关的单核苷酸多态性(SNP)进行验证尝试。
Pharmacogenomics. 2018 Feb;19(3):175-184. doi: 10.2217/pgs-2017-0187. Epub 2018 Jan 10.
7
Influence of Genetic Polymorphisms on Mycophenolic Acid Pharmacokinetics and Patient Outcomes in Renal Transplantation.遗传多态性对肾移植患者麦考酚酸药代动力学和临床结局的影响。
Curr Drug Metab. 2018;19(14):1199-1205. doi: 10.2174/1389200219666171227201608.
8
The TWEAK/Fn14 pathway is required for calcineurin inhibitor toxicity of the kidneys.TWEAK/Fn14 通路是钙调神经磷酸酶抑制剂肾毒性所必需的。
Am J Transplant. 2018 Jul;18(7):1636-1645. doi: 10.1111/ajt.14632. Epub 2018 Feb 6.
9
Genome-wide association study identifies the common variants in CYP3A4 and CYP3A5 responsible for variation in tacrolimus trough concentration in Caucasian kidney transplant recipients.全基因组关联研究确定了CYP3A4和CYP3A5中的常见变异体,这些变异体导致了白种人肾移植受者中他克莫司谷浓度的差异。
Pharmacogenomics J. 2018 May 22;18(3):501-505. doi: 10.1038/tpj.2017.49. Epub 2017 Nov 21.
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Late graft failure after kidney transplantation as the consequence of late versus early events.移植肾晚期失功:晚期与早期事件的后果。
Am J Transplant. 2018 May;18(5):1158-1167. doi: 10.1111/ajt.14590. Epub 2017 Dec 5.