Department of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.
Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA.
Sci Data. 2019 Feb 26;6:190028. doi: 10.1038/sdata.2019.28.
The spatial pattern of transgene expression in tetracycline-controlled mouse models is governed primarily by the driver line used to introduce the tetracycline-controlled transactivator (tTA). Detailed maps showing where each tTA driver activates expression are therefore essential for designing and using tet-regulated models, particularly in brain research where cell type and regional specificity determine the circuits affected by conditional gene expression. We have compiled a comprehensive online repository of serial microscopic images showing brain-wide reporter expression for five commonly used tTA driver lines. We have spatially registered all images to a common three-dimensional mouse brain anatomical reference atlas for direct comparison of spatial distribution across lines. The high-resolution images and associated metadata are shared via the web page of the EU Human Brain Project. Images can be inspected using an interactive viewing tool that includes an optional overlay feature providing anatomical delineations and reference atlas coordinates. Interactive viewing is supplemented by semi-quantitative analyses of expression levels within anatomical subregions for each tTA driver line.
四环素调控的小鼠模型中转基因表达的空间模式主要由引入四环素调控的转录激活因子(tTA)的驱动线决定。因此,详细显示每个 tTA 驱动子激活表达的图谱对于设计和使用 tet 调控模型至关重要,特别是在大脑研究中,细胞类型和区域特异性决定了受条件基因表达影响的回路。我们已经编制了一个综合的在线存储库,其中包含显示五个常用 tTA 驱动线的全脑报告基因表达的连续显微镜图像。我们已经将所有图像空间配准到一个共同的三维小鼠脑解剖参考图谱,以便直接比较跨线的空间分布。高分辨率图像和相关元数据通过欧盟人脑项目的网页共享。可以使用交互式查看工具检查图像,该工具包括一个可选的覆盖功能,提供解剖轮廓和参考图谱坐标。交互式查看通过对每个 tTA 驱动线的解剖子区域内的表达水平进行半定量分析进行补充。