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噬菌体适应复杂环境并无复杂性代价。

No Cost of Complexity in Bacteriophages Adapting to a Complex Environment.

机构信息

Center for Evolution and Medicine, Arizona State University, Tempe, Arizona 85287

Department of Biological Science, Florida State University, Tallahassee, Florida 32306.

出版信息

Genetics. 2019 May;212(1):267-276. doi: 10.1534/genetics.119.302029. Epub 2019 Feb 26.

Abstract

A long-standing prediction in evolutionary biology is that organisms experience a so-called "cost of complexity" manifested as a decreasing rate of adaptation in populations as organisms or selective environments become increasingly complex. This theory assumes the ubiquity of antagonistic pleiotropy, or trade-offs in fitness, for mutations affecting multiple traits or phenotypes. A particular manifestation of antagonism thought to be at play in adaptive dynamics involves the relationship between viral growth rate and capsid stability, an interaction that may impede the adaptation of viral pathogens to novel hosts and environments. Here, we present a comparison of the genetics of adaptation for populations of bacteriophages undergoing complete adaptive walks under both simple and complex selective conditions, with complexity being determined by the number of traits under directional selection. We found no evidence for a long-term cost of complexity in viruses experiencing complex selection, with on average at least as great a rate of adaptation under more complex conditions, and rampant evidence for synergistic, rather than antagonistic, pleiotropy. The lack of evident trade-offs between multiple phenotypes implies that emerging pathogens may be able to improve their growth in many different hosts or environments simultaneously, and to do so at a faster rate than previously anticipated.

摘要

进化生物学中的一个长期预测是,生物体经历所谓的“复杂性成本”,表现为随着生物体或选择环境变得越来越复杂,种群的适应率下降。该理论假设普遍存在拮抗多效性或适应度的权衡,即影响多个性状或表型的突变。一种被认为在适应动态中起作用的拮抗作用的特殊表现形式涉及病毒增长率和衣壳稳定性之间的关系,这种相互作用可能会阻碍病毒病原体对新宿主和环境的适应。在这里,我们比较了在简单和复杂选择条件下经历完全适应性进化的噬菌体种群的适应性遗传,其中复杂性由定向选择下的性状数量决定。我们没有发现经历复杂选择的病毒存在长期复杂性成本的证据,在更复杂的条件下,平均适应率至少更高,并且存在大量协同作用的证据,而不是拮抗作用的多效性。多个表型之间没有明显的权衡意味着新兴病原体可能能够同时提高其在许多不同宿主或环境中的生长速度,并且比以前预期的更快。

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4
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5
The emergence of performance trade-offs during local adaptation: insights from experimental evolution.
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6
Synergistic Pleiotropy Overrides the Costs of Complexity in Viral Adaptation.
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7
The Kinetic and Thermodynamic Aftermath of Horizontal Gene Transfer Governs Evolutionary Recovery.
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8
Payoffs, not tradeoffs, in the adaptation of a virus to ostensibly conflicting selective pressures.
PLoS Genet. 2014 Oct 2;10(10):e1004611. doi: 10.1371/journal.pgen.1004611. eCollection 2014 Oct.
9
The evolution of life history trade-offs in viruses.
Curr Opin Virol. 2014 Oct;8:79-84. doi: 10.1016/j.coviro.2014.07.005. Epub 2014 Aug 1.
10
QTL mapping of freezing tolerance: links to fitness and adaptive trade-offs.
Mol Ecol. 2014 Sep;23(17):4304-15. doi: 10.1111/mec.12862. Epub 2014 Aug 12.

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