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偶极子支持的电子共振介导电子诱导的酰胺键断裂。

Dipole-Supported Electronic Resonances Mediate Electron-Induced Amide Bond Cleavage.

机构信息

Radiation Laboratory, University of Notre Dame, Notre Dame, Indiana 46556, USA.

Department of Physics, University of Notre Dame, Notre Dame, Indiana 46556, USA.

出版信息

Phys Rev Lett. 2019 Feb 22;122(7):073002. doi: 10.1103/PhysRevLett.122.073002.

Abstract

Dissociative electron attachment (DEA) plays a key role in radiation damage of biomolecules under high-energy radiation conditions. The initial step in DEA is often rationalized in terms of resonant electron capture into one of the metastable valence states of a molecule followed by its fragmentation. Our combined theoretical and experimental investigations indicate that the manifold of states responsible for electron capture in the DEA process can be dominated by core-excited (shake-up) dipole-supported resonances. Specifically, we present the results of experimental and computational studies of the gas-phase DEA to three prototypical peptide molecules, formamide, N-methylformamide (NMF), and N,N-dimethyl-formamide (DMF). In contrast to the case of electron capture by positively charged peptides in which amide bond rupture is rare compared to N─C_{α} bond cleavage, fragmentation of the amide bond was observed in each of these three molecules. The ion yield curves for ions resulting from this amide bond cleavage, such as NH_{2}^{-} for formamide, NHCH_{3}^{-} for NMF, and N(CH_{3})_{2}^{-} for DMF, showed a double-peak structure in the region between 5 and 8 eV. The peaks are assigned to Feshbach resonances including core-excited dipole-supported resonances populated upon electron attachment based on high-level electronic structure calculations. Moreover, the lower energy peak is attributed to formation of the core-excited resonance that correlates with the triplet state of the neutral molecule. The latter process highlights the role of optically spin-forbidden transitions promoted by electron impact in the DEA process.

摘要

离解电子俘获(DEA)在高能辐射条件下生物分子的辐射损伤中起着关键作用。DEA 的初始步骤通常可以用分子的一个亚稳态价态中的共振电子俘获来合理化,然后是其碎片化。我们的理论和实验综合研究表明,负责 DEA 过程中电子俘获的状态可以由核心激发(振升)偶极子支持的共振主导。具体来说,我们提出了对三种典型肽分子、甲酰胺、N-甲基甲酰胺(NMF)和 N,N-二甲基甲酰胺(DMF)的气相 DEA 的实验和计算研究结果。与正电荷肽中电子俘获的情况相反,在这种情况下,酰胺键的断裂比 N─C_{α}键的断裂罕见,在这三种分子中都观察到了酰胺键的断裂。这种酰胺键断裂产生的离子的离子产率曲线,例如甲酰胺的 NH_{2}^{-}、NMF 的 NHCH_{3}^{-}和 DMF 的 N(CH_{3})_{2}^{-},在 5 到 8 eV 之间的区域显示出双峰结构。这些峰被分配给 Feshbach 共振,包括基于高精度电子结构计算的电子俘获后产生的核心激发偶极子支持共振。此外,较低能量的峰归因于与中性分子三重态相关的核心激发共振的形成。后一过程突出了电子碰撞促进的光学自旋禁戒跃迁在 DEA 过程中的作用。

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