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利用混合物解卷积比较进行样本间污染检测。

Inter-sample contamination detection using mixture deconvolution comparison.

机构信息

Forensic Science SA, GPO Box 2790, Adelaide, SA 5001, Australia; School of Biological Sciences, Flinders University, GPO Box 2100 Adelaide, SA 5001, Australia.

Forensic Science SA, GPO Box 2790, Adelaide, SA 5001, Australia.

出版信息

Forensic Sci Int Genet. 2019 May;40:160-167. doi: 10.1016/j.fsigen.2019.02.021. Epub 2019 Feb 26.

Abstract

A recent publication has provided the ability to compare two mixed DNA profiles and consider their probability of occurrence if they do, compared to if they do not, have a common contributor. This ability has applications to both quality assurance (to test for sample to sample contamination) and for intelligence gathering purposes (did the same unknown offender donate DNA to multiple samples). We use a mixture to mixture comparison tool to investigate the prevalence of sample to sample contamination that could occur from two laboratory mechanisms, one during DNA extraction and one during electrophoresis. By carrying out pairwise comparisons of all samples (deconvoluted using probabilistic genotyping software STRmix™) within extraction or run batches we identify any potential common DNA donors and investigate these with respect to their risk of contamination from the two proposed mechanisms. While not identifying any contamination, we inadvertently find a potential intelligence link between samples, showing the use of a mixture to mixture comparison tool for investigative purposes.

摘要

最近的一项出版物提供了比较两个混合 DNA 谱的能力,并考虑了它们是否有共同的贡献者,如果有,与如果没有,它们发生的概率。这种能力既适用于质量保证(测试样品之间的污染),也适用于情报收集目的(同一个未知罪犯是否向多个样本捐赠了 DNA)。我们使用混合物对混合物比较工具来调查两种实验室机制(一种在 DNA 提取过程中,另一种在电泳过程中)可能发生的样品间污染的流行率。通过对提取或运行批次中的所有样本(使用概率基因型 STRmix™软件解卷积)进行成对比较,我们确定了任何潜在的共同 DNA 供体,并根据这两种拟议机制的污染风险对其进行了研究。虽然没有发现任何污染,但我们无意中发现了样本之间的潜在情报联系,显示了混合物对混合物比较工具在调查目的中的使用。

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