Conte Emanuele, Mende Linda, Grainge Ian, Colloms Sean D
Institute of Molecular Cell and Systems Biology, University of Glasgow, Glasgow, United Kingdom.
School of Environmental and Life Sciences, University of Newcastle, Newcastle, NSW, Australia.
Front Microbiol. 2019 Feb 27;10:280. doi: 10.3389/fmicb.2019.00280. eCollection 2019.
Transposons are invaluable biological tools for the genetic manipulation of microorganisms. ISY100 from sp. PCC6803 is a member of the Tc1//IS superfamily, and is characterized by high transposition efficiency and a strong preference for TA target sequences. In this paper, we describe the design and application of a mini-ISY100 suicide vector for the creation of stable random transposon insertion libraries. The system was successfully applied in seven species belonging to four different orders of γ proteobacteria. In all cases, delivery using conjugation consistently showed the highest transposition efficiency compared to chemical transformation or electroporation. We determined the frequency of transposon insertions in all the species and proved the utility of the system by identifying genes involved in colony coloration in . The ease and the efficiency of the protocol developed here allow the creation of complete knock-out libraries in an extensive range of host microorganisms in less than a week with no requirement for preparatory modification.
转座子是用于微生物基因操作的宝贵生物学工具。来自集胞藻属PCC6803的ISY100是Tc1//IS超家族的成员,其特点是转座效率高,对TA靶序列有强烈偏好。在本文中,我们描述了一种用于创建稳定随机转座子插入文库的微型ISY100自杀载体的设计和应用。该系统已成功应用于属于γ-变形菌纲四个不同目下的七个物种。在所有情况下,与化学转化或电穿孔相比,通过接合进行传递始终显示出最高的转座效率。我们确定了所有物种中转座子插入的频率,并通过鉴定参与[具体物种]菌落着色的基因证明了该系统的实用性。本文开发的方案简便且高效,无需进行前期修饰,即可在不到一周的时间内为广泛的宿主微生物创建完整的基因敲除文库。