School of Chemistry , Trinity College Dublin , 152-160 Pearse Street , Dublin 2 , Ireland.
Irish Centre of High-End Computing, Grand Canal Quay, Dublin 2 , Ireland.
J Chem Inf Model. 2019 May 28;59(5):2479-2486. doi: 10.1021/acs.jcim.9b00140. Epub 2019 Mar 27.
A theoretical study has been carried out at the M062X/6-311++G(d,p) computational level to search for a rationale on ligands' affinity toward α-adrenoceptors by estimating the nature and strength of intramolecular hydrogen bonds potentially formed (by means of the QTAIM and NBO approaches) as well as the degree of deviation from planarity that could be observed in some of the compounds. Four different families have been studied: thiophen-2-yl, 3-carboxylatethiophen-2-yl esters, 3-cyanothiophen-2-yl, and 2-thiazolyl guanidinium derivatives. In the case of the thiophen-2-yl guanidines not substituted in the 3 position, nonplanarity was always observed, whereas in the thiazole series, intramolecular hydrogen bonds were identified between the guanidinium and the thiazole ring forcing the systems to planarity. Regarding the carboxylic esters, two different rotamers were found: quasi-planar and quasi-perpendicular systems with very similar energy. Both of these isomers can form different nets of intramolecular hydrogen bonds and other types of noncovalent interactions. Different physicochemical properties such as basicity, solubility, or lipophilicity were calculated for these systems, but no correlation to the degree of planarity was found. However, when comparing the α2-ARs affinity with the planarity of the molecules, a trend appears in the thiophen-2-yl guanidinium series indicating that lack of planarity seems to be optimal for α2-ARs engagement.
本文在 M062X/6-311++G(d,p) 计算水平上进行了理论研究,通过估计可能形成的分子内氢键的性质和强度(通过 QTAIM 和 NBO 方法)以及在某些化合物中观察到的平面偏离程度,来寻找配体对α-肾上腺素能受体亲和力的原理。研究了四个不同的家族:噻吩-2-基、3-羧基噻吩-2-基酯、3-氰基噻吩-2-基和 2-噻唑基胍衍生物。对于未在 3 位取代的噻吩-2-基胍,总是观察到非平面性,而在噻唑系列中,胍基和噻唑环之间存在分子内氢键,迫使这些体系平面化。关于羧酸酯,发现了两种不同的构象:准平面和准垂直体系,能量非常相似。这两种异构体都可以形成不同的分子内氢键网络和其他类型的非共价相互作用。为这些体系计算了不同的物理化学性质,如碱性、溶解度或亲脂性,但没有发现与平面性的相关性。然而,当比较 α2-ARs 的亲和力与分子的平面性时,在噻吩-2-基胍系列中出现了一种趋势,表明缺乏平面性似乎是与 α2-ARs 结合的最佳状态。