Department of Biology, Portland State University, Portland, OR, 97201, USA.
Mol Microbiol. 2019 Jun;111(6):1638-1651. doi: 10.1111/mmi.14242. Epub 2019 May 6.
The accurate completion of DNA replication on the chromosome requires RecBCD and structure specific SbcCD and ExoI nucleases. However, the substrates and mechanism by which this reaction occurs remains unknown. Here we show that these completion enzymes operate on plasmid substrates containing two replisomes, but are not required for plasmids containing one replisome. Completion on the two-replisome plasmids requires RecBCD, but does not require RecA and no broken intermediates accumulate in its absence, indicating that the completion reaction occurs normally in the absence of any double-strand breaks. Further, similar to the chromosome, we show that when the normal completion reaction is prevented, an aberrant RecA-mediated recombination process leads to amplifications that drive most of the instabilities associated with the two-replisome substrates. The observations imply that the substrate SbcCD, ExoI and RecBCD act upon in vivo is created specifically by two convergent replisomes, and demonstrate that the function of RecBCD in completing replication is independent of double-strand break repair, and likely promotes joining of the strands of the convergent replication forks.
准确完成染色体上的 DNA 复制需要 RecBCD 和结构特异性 SbcCD 和 ExoI 核酸酶。然而,该反应发生的底物和机制仍不清楚。在这里,我们表明这些完成酶作用于含有两个复制体的质粒底物上,但对于含有一个复制体的质粒则不需要。在两个复制体质粒上的完成需要 RecBCD,但不需要 RecA,并且在其不存在的情况下不会积累任何断裂中间体,表明在没有任何双链断裂的情况下,完成反应正常发生。此外,与染色体相似,我们表明当正常的完成反应被阻止时,异常的 RecA 介导的重组过程会导致扩增,从而导致与两个复制体底物相关的大多数不稳定性。这些观察结果表明,底物 SbcCD、ExoI 和 RecBCD 在体内作用的是由两个汇聚复制体专门创建的,并表明 RecBCD 在完成复制中的功能独立于双链断裂修复,并且可能促进汇聚复制叉的链的连接。