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SWI/SNF 染色质重塑控制 Notch 反应性增强子可及性。

SWI/SNF chromatin remodeling controls Notch-responsive enhancer accessibility.

机构信息

Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, UK.

Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, UK

出版信息

EMBO Rep. 2019 May;20(5). doi: 10.15252/embr.201846944. Epub 2019 Mar 26.

Abstract

Notch signaling plays a key role in many cell fate decisions during development by directing different gene expression programs via the transcription factor CSL, known as Su(H) in Which target genes are responsive to Notch signaling is influenced by the chromatin state of enhancers, yet how this is regulated is not fully known. Detecting a specific increase in the histone variant H3.3 in response to Notch signaling, we tested which chromatin remodelers or histone chaperones are required for the changes in enhancer accessibility to Su(H) binding. We show a crucial role for the Brahma SWI/SNF chromatin remodeling complex, including the actin-related BAP55 subunit, in conferring enhancer accessibility and enabling the transcriptional response to Notch activity. The Notch-responsive regions have high levels of nucleosome turnover which depend on the Brahma complex, increase in magnitude with Notch signaling, and primarily involve histone H3.3. Together these results highlight the importance of SWI/SNF-mediated nucleosome turnover in rendering enhancers responsive to Notch.

摘要

Notch 信号通路在发育过程中通过转录因子 CSL(在果蝇中称为 Su(H))指导不同的基因表达程序,在许多细胞命运决定中发挥着关键作用。哪些靶基因对 Notch 信号敏感受增强子的染色质状态影响,但这种调控方式尚不完全清楚。我们检测到组蛋白变体 H3.3 在 Notch 信号响应中的特异性增加,然后测试了哪些染色质重塑因子或组蛋白伴侣对于增强子对 Su(H)结合的可及性的变化是必需的。我们表明,Brahma SWI/SNF 染色质重塑复合物(包括肌动蛋白相关的 BAP55 亚基)在赋予增强子可及性并使转录对 Notch 活性做出响应方面起着至关重要的作用。Notch 反应区域具有高水平的核小体周转,这依赖于 Brahma 复合物,随着 Notch 信号的增加,其幅度增加,主要涉及组蛋白 H3.3。这些结果共同强调了 SWI/SNF 介导的核小体周转在使增强子对 Notch 敏感方面的重要性。

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