1 Department of Medical Biology; School of Medicine; University of Split, Split, Croatia.
2 MRC Human Genetics Unit, Institute of Genetics and Molecular Medicine; University of Edinburgh, Western General Hospital, Edinburgh, United Kingdom.
Thyroid. 2019 Jun;29(6):886-893. doi: 10.1089/thy.2018.0661. Epub 2019 May 13.
Thyroglobulin (Tg) is a 660 kDa iodoglycoprotein that serves as a scaffold for thyroid hormone synthesis. Although a twin study showed that variability of serum Tg levels has a substantial genetic basis, no genome-wide association study (GWAS) of serum/plasma Tg levels has been performed to date. The aim of this study was to identify genetic variants associated with plasma Tg levels among healthy individuals. A GWAS was conducted on two Croatian cohorts, and a combined analysis was performed. The analyses included 1094 individuals. A total of 7,597,379 variants, imputed using the 1000 Genomes reference panel, were analyzed for association. GWAS was performed under an additive model, controlling for age, sex, and relatedness within each data set. Combined analysis was conducted using the inverse-variance fixed-effects method. Sixteen variants located on chromosome 3, within the gene, reached genome-wide significance. The lead SNP was rs4012172 ( \documentclass{aastex}\usepackage{amsbsy}\usepackage{amsfonts}\usepackage{amssymb}\usepackage{bm}\usepackage{mathrsfs}\usepackage{pifont}\usepackage{stmaryrd}\usepackage{textcomp}\usepackage{portland, xspace}\usepackage{amsmath, amsxtra}\usepackage{upgreek}\pagestyle{empty}\DeclareMathSizes{10}{9}{7}{6}\begin{document} $$p = 1.29 \times {10^{ - 10}}$$ \end{document} ), which explained 3.19% of the variance in Tg levels. belongs to the sialyltransferase protein family, which has a fundamental role in the synthesis of specific sialylated structures on various glycoproteins, including Tg. It is known that only immature Tg (poorly sialylated or desialylated) can be transferred to the bloodstream. A highly biologically plausible locus was identified that could have a role in the regulation of plasma Tg levels in healthy individuals.
甲状腺球蛋白(Tg)是一种 660kDa 的糖蛋白,它作为甲状腺激素合成的支架。尽管双胞胎研究表明,血清 Tg 水平的变异性具有很大的遗传基础,但迄今为止尚未进行全基因组关联研究(GWAS)来研究血清/血浆 Tg 水平。本研究旨在鉴定健康个体中与血浆 Tg 水平相关的遗传变异。对两个克罗地亚队列进行了 GWAS,并进行了联合分析。分析包括 1094 个人。使用 1000 基因组参考面板进行了总计 7597379 个变体的分析,以进行关联分析。GWAS 是在加性模型下进行的,在每个数据集内控制年龄、性别和相关性。使用逆方差固定效应方法进行联合分析。位于染色体 3 上,位于基因内的 16 个变体达到全基因组显着性。领先的 SNP 是 rs4012172(\documentclass{aastex}\usepackage{amsbsy}\usepackage{amsfonts}\usepackage{amssymb}\usepackage{bm}\usepackage{mathrsfs}\usepackage{pifont}\usepackage{stmaryrd}\usepackage{textcomp}\usepackage{portland, xspace}\usepackage{amsmath, amsxtra}\usepackage{upgreek}\pagestyle{empty}\DeclareMathSizes{10}{9}{7}{6}\begin{document} $$p = 1.29 \times {10^{ - 10}}$$ \end{document} ),它解释了 Tg 水平变异的 3.19%。属于唾液酸转移酶蛋白家族,在各种糖蛋白上特定唾液酸化结构的合成中具有重要作用,包括 Tg。已知只有不成熟的 Tg(唾液酸化程度低或去唾液酸化)才能转移到血液中。鉴定出一个高度生物学上合理的基因座,它可能在调节健康个体的血浆 Tg 水平中起作用。