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探索二氟取代氨基磷酸酯衍生物中的伴随/构象二态性。

Exploring concomitant/conformational dimorphism in a difluoro-substituted phosphoramidate derivative.

作者信息

Hasija Avantika, Chopra Deepak

机构信息

Department of Chemistry, Indian Institute of Science Education and Research, Bhopal By-Pass Road, Bhopal, Madhya Pradesh 462 066, India.

出版信息

Acta Crystallogr C Struct Chem. 2019 Apr 1;75(Pt 4):451-461. doi: 10.1107/S2053229619003589. Epub 2019 Mar 25.

DOI:10.1107/S2053229619003589
PMID:30957791
Abstract

The concomitant occurrence of dimorphs of diphenyl (3,4-difluorophenyl)phosphoramidate, CHFNOP, was observed via a solution-mediated crystallization process with variation in the symmetry-free molecules (Z'). The existence of two forms, i.e. Form I (block, Z' = 1) and Form II (needle, Z' = 2), was characterized by single-crystal X-ray diffraction, differential scanning calorimetry and powder X-ray diffraction. Furthermore, a quantitative analysis of the energetics of the different intermolecular interactions was carried out via the energy decomposition method (PIXEL), which corroborates with inputs from the energy framework and looks at the topology of the various intermolecular interactions present in both forms. The unequivocally distinguished contribution of strong N-H...O hydrogen bonds along with other interactions, such as C-H...O, C-H...F, π-π and C-H...π, mapped on the Hirshfeld surface is depicted by two-dimensional fingerprint plots. Apart from the major electrostatic contribution from N-H...O hydrogen bonds, the crystal structures are stabilized by contributions from the dispersion energy. The closely related melting points and opposite trends in the calculated lattice energies are interesting to investigate with respect to the thermodynamic stability of the observed dimorphs. The significant variation in the torsion angles in both forms helps in classifying them in the category of conformational polymorphs.

摘要

通过溶液介导的结晶过程,在无对称分子(Z')变化的情况下,观察到二苯基(3,4 - 二氟苯基)磷酰胺酯(CHFNOP)的两种晶型同时出现。通过单晶X射线衍射、差示扫描量热法和粉末X射线衍射对两种晶型,即晶型I(块状,Z' = 1)和晶型II(针状,Z' = 2)的存在进行了表征。此外,通过能量分解方法(PIXEL)对不同分子间相互作用的能量进行了定量分析,该方法与能量框架的输入结果相佐证,并研究了两种晶型中存在的各种分子间相互作用的拓扑结构。二维指纹图谱描绘了沿Hirshfeld表面映射的强N - H...O氢键以及其他相互作用(如C - H...O、C - H...F、π - π和C - H...π)的明确区分贡献。除了N - H...O氢键的主要静电贡献外,晶体结构还通过色散能的贡献得以稳定。就观察到的两种晶型的热力学稳定性而言,它们相近的熔点和计算晶格能的相反趋势值得研究。两种晶型中扭转角的显著变化有助于将它们归类为构象多晶型物。

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