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蠕虫状链在拉伸流动下的解折叠动力学

Unfolding Kinetics of a Wormlike Chain under Elongational Flow.

作者信息

Odijk Theo

机构信息

Lorentz Institute for Theoretical Physics, Leiden University, 2333 CA Leiden, The Netherlands.

出版信息

Polymers (Basel). 2017 May 26;9(6):190. doi: 10.3390/polym9060190.

DOI:10.3390/polym9060190
PMID:30970869
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6432198/
Abstract

A simple theory of the unfolding kinetics of a semi-flexible polymer chain is presented in terms of a Kramers type picture for the energy of elongation. The hydrodynamic interactions are discussed in terms of slender body theory. It turns out that the elongation of the chain is basically linear in time and independent of the viscosity. The former prediction agrees with experiments on the stretching dynamics of DNA under planar elongational flow. Nevertheless, the theory overestimates the experimental rate by a significant amount for reasons that are unclear.

摘要

本文依据克拉默斯型伸长能图景,提出了一种半柔性聚合物链展开动力学的简单理论。依据细长体理论讨论了流体动力学相互作用。结果表明,链的伸长在时间上基本呈线性,且与粘度无关。前一个预测与平面拉伸流作用下DNA拉伸动力学的实验结果相符。然而,由于尚不清楚的原因,该理论显著高估了实验速率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80b6/6432198/1975fa15b105/polymers-09-00190-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80b6/6432198/9f4611387fe5/polymers-09-00190-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80b6/6432198/1975fa15b105/polymers-09-00190-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80b6/6432198/9f4611387fe5/polymers-09-00190-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80b6/6432198/1975fa15b105/polymers-09-00190-g002.jpg

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本文引用的文献

1
Buckling a Semiflexible Polymer Chain under Compression.在压缩状态下使半柔性聚合物链发生屈曲
Polymers (Basel). 2017 Mar 11;9(3):99. doi: 10.3390/polym9030099.
2
How to determine local stretching and tension in a flow-stretched DNA molecule.如何确定流拉伸 DNA 分子中的局部拉伸和张力。
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Trapping, entrainment and synchronization of semiflexible polymers in narrow, asymmetric confinements.半柔性聚合物在狭窄、不对称受限环境中的捕获、夹带和同步。
Soft Matter. 2016 Jan 7;12(1):87-92. doi: 10.1039/c5sm02304a.
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Hydrodynamics of diatom chains and semiflexible fibres.硅藻链和半刚性纤维的流体动力学。
J R Soc Interface. 2014 Apr 30;11(96):20140314. doi: 10.1098/rsif.2014.0314. Print 2014 Jul 6.
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Fluctuations, dynamics, and the stretch-coil transition of single actin filaments in extensional flows.在拉伸流中单肌动蛋白丝的涨落、动力学和伸展卷曲转变。
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Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Oct;82(4 Pt 2):046307. doi: 10.1103/PhysRevE.82.046307. Epub 2010 Oct 19.
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Stretching of buckled filaments by thermal fluctuations.热涨落对弯曲细丝的拉伸作用。
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Compressing a rigid filament: buckling and cyclization.压缩刚性细丝:屈曲与环化
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