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[不同生长年份霍山石斛内生菌的多样性与差异性]

[Diversity and difference of endophytes in Dendrobium huoshanense with different growth years].

作者信息

Chen Shao-Tong, Dai Jun, Jiang Xue-Ping, Song Xiang-Wen, Chen Cun-Wu, Chen Nai-Fu, Guo Lan-Ping, Han Bang-Xing

机构信息

College of Pharmacy,Anhui University of Chinese Medicine Hefei 230038,China College of Biological and Pharmaceutical Engineering,West Anhui University Lu'an 237012,China.

College of Biological and Pharmaceutical Engineering,West Anhui University Lu'an 237012,China Anhui Province Traditional Chinese Medicine Resource Protection and Sustainable Utilization Engineering Laboratory Lu'an 237012,China.

出版信息

Zhongguo Zhong Yao Za Zhi. 2019 Mar;44(6):1145-1150. doi: 10.19540/j.cnki.cjcmm.2019.0022.

Abstract

In order to explore endophytes diversity and difference in Dendrobium huoshanense,in this paper,the metagenomics method was used to analyze the endophytic bacteria and fungi community of 5 groups include 30 samples in different growth years. The results indicate that 3 540 bacterial OTUs were identified from D. huoshanense,and there are 138 OTUs in 5 groups simultaneously;2 168 fungal OTUs were identified,and 143 OTUs exist in 5 groups simultaneously. The dominate endophytic bacteria community are Sphingomonas sp.,Acinetobacter sp.,Burkholderia sp.,Methylobacterium sp.,Enterococcus sp.,Bacillus sp.,the difference endophytic bacteria community are Oceanobacillusd sp.,Actinomycetospora sp.,Paenibacillus sp.. The dominate endophytic fungi community are Zasmidium sp.,Zymoseptoria sp.,Alternaria sp.,Cladosporium sp.,Fusarium sp.,the difference endophytic fungi community are Cyphellophore sp.,Fusarium sp.. The results of clustering revealed that both the endophytic bacteria and the endophytic fungi,ⅢY2 and ⅢY3 are complete clustered,and ⅡY1 and ⅢY1 are also cluster completely. These enriched the species and resources of endophytic bacteria and fungi in D. huoshanense,and provided a theoretical reference for the reasonable harvest of D. huoshanense.

摘要

为探究霍山石斛内生菌的多样性及差异,本文采用宏基因组学方法对不同生长年份的5组共30个样本的内生细菌和真菌群落进行分析。结果表明,从霍山石斛中鉴定出3540个细菌OTU,5组样本中同时存在138个OTU;鉴定出2168个真菌OTU,5组样本中同时存在143个OTU。优势内生细菌群落为鞘氨醇单胞菌属、不动杆菌属、伯克霍尔德菌属、甲基杆菌属、肠球菌属、芽孢杆菌属,差异内生细菌群落为嗜盐芽孢杆菌属、放线孢菌属、类芽孢杆菌属。优势内生真菌群落为枝顶孢属、麦角菌属、链格孢属、枝孢属、镰刀菌属,差异内生真菌群落为杯状菌属、镰刀菌属。聚类结果显示,内生细菌和内生真菌中,ⅢY2和ⅢY3完全聚类,ⅡY1和ⅢY1也完全聚类。这些丰富了霍山石斛内生细菌和真菌的物种及资源,为霍山石斛的合理采收提供了理论参考。

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