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通过改进始终稳定的预测-校正器降低可极化力场的计算成本。

Reduced computational cost of polarizable force fields by a modification of the always stable predictor-corrector.

作者信息

Nocito Dominique, Beran Gregory J O

机构信息

Department of Chemistry, University of California, Riverside, California 92521, USA.

出版信息

J Chem Phys. 2019 Apr 21;150(15):151103. doi: 10.1063/1.5092133.

Abstract

Classical polarizable force fields effectively incorporate the dynamic response of the electronic charge distributions into molecular dynamics simulations, but they do so at a significant increase in computational cost compared to simpler models. Here, we demonstrate how one can improve the stability of a polarizable force field molecular dynamics simulation or accelerate the evaluation of self-consistent polarization via a simple extension of the predictor in the always stable predictor-corrector method. Specifically, increasing the number of prior steps used in the predictor from 6 to 16 reduces the energy drift by an order of magnitude. Alternatively, for a given level of energy drift, the induced dipoles can be obtained ∼20% faster due to the reduced number of self-consistent field iterations required to maintain energetic stability. The extended-history predictor is straightforward to implement and involves minimal computational overhead.

摘要

经典可极化力场有效地将电子电荷分布的动态响应纳入分子动力学模拟中,但与更简单的模型相比,这样做会显著增加计算成本。在此,我们展示了如何通过在始终稳定的预测-校正方法中对预测器进行简单扩展,来提高可极化力场分子动力学模拟的稳定性或加速自洽极化的评估。具体而言,将预测器中使用的先前步数从6增加到16可将能量漂移降低一个数量级。或者,对于给定的能量漂移水平,由于维持能量稳定性所需的自洽场迭代次数减少,诱导偶极子的获取速度可加快约20%。扩展历史预测器易于实现,且计算开销极小。

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