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探究细菌磷酸胆碱转移酶 AnkX 的底物范围,以实现蛋白质的多功能化。

Exploring the Substrate Scope of the Bacterial Phosphocholine Transferase AnkX for Versatile Protein Functionalization.

机构信息

Chemical Biology Center (KBC), Department of Chemistry, Umeå University, Linnaeus väg 10, 90187, Umeå, Sweden.

Department of Biochemistry and Signal Transduction, University Medical Centre Hamburg-Eppendorf (UKE), Martinistrasse 52, 20246, Hamburg, Germany.

出版信息

Chembiochem. 2019 Sep 16;20(18):2336-2340. doi: 10.1002/cbic.201900200. Epub 2019 Aug 21.

DOI:10.1002/cbic.201900200
PMID:31054261
Abstract

Site-specific protein functionalization has become an indispensable tool in modern life sciences. Here, tag-based enzymatic protein functionalization techniques are among the most versatilely applicable approaches. However, many chemo-enzymatic functionalization strategies suffer from low substrate scopes of the enzymes utilized for functional labeling probes. We report on the wide substrate scope of the bacterial enzyme AnkX towards derivatized CDP-choline analogues and demonstrate that AnkX-catalyzed phosphocholination can be used for site-specific one- and two-step protein labeling with a broad array of different functionalities, displaying fast second-order transfer rates of 5×10 to 1.8×10  m  s . Furthermore, we also present a strategy for the site-specific dual labeling of proteins of interest, based on the exploitation of AnkX and the delabeling function of the enzyme Lem3. Our results contribute to the wide field of protein functionalization, offering an attractive chemo-enzymatic tag-based modification strategy for in vitro labeling.

摘要

基于标签的酶法蛋白质功能化技术是现代生命科学中不可或缺的工具。然而,许多化学酶法功能化策略都受到所使用酶的功能化探针的底物范围的限制。我们报道了细菌酶 AnkX 对衍生化 CDP-胆碱类似物的广泛底物范围,并证明 AnkX 催化的磷酰化可以用于具有广泛不同功能的蛋白质的一步和两步的定点标记,显示出快速的二级转移速率为 5×10 到 1.8×10 m s 。此外,我们还提出了一种基于 AnkX 的定点双标记策略和酶 Lem3 的去标签功能,用于对感兴趣的蛋白质进行定点双标记。我们的结果为蛋白质功能化的广泛领域做出了贡献,为体外标记提供了一种有吸引力的基于化学酶标签的修饰策略。

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Exploring the Substrate Scope of the Bacterial Phosphocholine Transferase AnkX for Versatile Protein Functionalization.探究细菌磷酸胆碱转移酶 AnkX 的底物范围,以实现蛋白质的多功能化。
Chembiochem. 2019 Sep 16;20(18):2336-2340. doi: 10.1002/cbic.201900200. Epub 2019 Aug 21.
2
Unraveling the Phosphocholination Mechanism of the Legionella pneumophila Enzyme AnkX.解析嗜肺军团菌酶AnkX的磷酸胆碱化机制
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Effector AnkX Disrupts Host Cell Endocytic Recycling in a Phosphocholination-Dependent Manner.效应物 AnkX 通过磷酰胆碱依赖性方式破坏宿主细胞内吞体再循环。
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effector AnkX displaces the switch II region for Rab1b phosphocholination.效应因子 AnkX 置换 Rab1b 磷酸化的开关 II 区。
Sci Adv. 2020 May 15;6(20):eaaz8041. doi: 10.1126/sciadv.aaz8041. eCollection 2020 May.
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1-beta-D-arabinofuranosylcytosine-diphosphate-choline is formed by the reversal of cholinephosphotransferase and not via cytidylyltransferase.1-β-D-阿拉伯呋喃糖基胞嘧啶二磷酸胆碱是由胆碱磷酸转移酶的逆向反应形成的,而非通过胞苷酰转移酶形成。
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CDP-choline: 1,2-diacylglycerol cholinephosphotransferase from rat liver microsomes. II. Photoaffinity labeling by radioactive CDP-choline analogs.胞苷二磷酸胆碱:大鼠肝脏微粒体中的1,2-二酰基甘油胆碱磷酸转移酶。II. 放射性胞苷二磷酸胆碱类似物的光亲和标记
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Covalent Protein Labeling by Enzymatic Phosphocholination.酶促磷酰化的共价蛋白质标记。
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Dephosphocholination by Legionella effector Lem3 functions through remodelling of the switch II region of Rab1b.军团菌效应蛋白 Lem3 通过重塑 Rab1b 的开关 II 区域实现去磷酸胆碱化。
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Kinetic selectivity of cholinephosphotransferase in mouse liver: the Km for CDP-choline depends on diacylglycerol structure.小鼠肝脏中胆碱磷酸转移酶的动力学选择性:CDP-胆碱的米氏常数取决于二酰基甘油的结构。
Biochem J. 1993 Feb 1;289 ( Pt 3)(Pt 3):815-20. doi: 10.1042/bj2890815.

引用本文的文献

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Dephosphocholination by Legionella effector Lem3 functions through remodelling of the switch II region of Rab1b.军团菌效应蛋白 Lem3 通过重塑 Rab1b 的开关 II 区域实现去磷酸胆碱化。
Nat Commun. 2023 Apr 19;14(1):2245. doi: 10.1038/s41467-023-37621-7.
2
The unity of opposites: Strategic interplay between bacterial effectors to regulate cellular homeostasis.对立面的统一:细菌效应物调节细胞内稳态的策略相互作用。
J Biol Chem. 2021 Dec;297(6):101340. doi: 10.1016/j.jbc.2021.101340. Epub 2021 Oct 23.
3
Bacterial virulence mediated by orthogonal post-translational modification.
细菌正交翻译后修饰介导的毒力。
Nat Chem Biol. 2020 Oct;16(10):1043-1051. doi: 10.1038/s41589-020-0638-2. Epub 2020 Sep 17.
4
effector AnkX displaces the switch II region for Rab1b phosphocholination.效应因子 AnkX 置换 Rab1b 磷酸化的开关 II 区。
Sci Adv. 2020 May 15;6(20):eaaz8041. doi: 10.1126/sciadv.aaz8041. eCollection 2020 May.