INDRA-IPM：使用自然语言进行交互式通路建模，并实现自动化组装。
INDRA-IPM: interactive pathway modeling using natural language with automated assembly.
机构信息
Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA, USA.
出版信息
Bioinformatics. 2019 Nov 1;35(21):4501-4503. doi: 10.1093/bioinformatics/btz289.
SUMMARY
INDRA-IPM (Interactive Pathway Map) is a web-based pathway map modeling tool that combines natural language processing with automated model assembly and visualization. INDRA-IPM contextualizes models with expression data and exports them to standard formats.
AVAILABILITY AND IMPLEMENTATION
INDRA-IPM is available at: http://pathwaymap.indra.bio. Source code is available at http://github.com/sorgerlab/indra_pathway_map. The underlying web service API is available at http://api.indra.bio:8000.
SUPPLEMENTARY INFORMATION
Supplementary data are available at Bioinformatics online.
摘要
INDRA-IPM（交互式通路图）是一个基于网络的通路图建模工具，它将自然语言处理与自动化模型组装和可视化相结合。INDRA-IPM 使用表达数据对模型进行上下文处理，并将其导出到标准格式。
可用性和实现
INDRA-IPM 可在以下网址获得：http://pathwaymap.indra.bio。源代码可在以下网址获得：http://github.com/sorgerlab/indra_pathway_map。基础网络服务 API 可在以下网址获得：http://api.indra.bio:8000。
补充信息
补充数据可在 Bioinformatics 在线获得。
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