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1
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species.果蝇属中组织特异性可变多聚腺苷酸化的景观和进化。
Genome Biol. 2017 Nov 30;18(1):229. doi: 10.1186/s13059-017-1358-0.
2
Protein Phosphatase 1 inactivates Mps1 to ensure efficient Spindle Assembly Checkpoint silencing.蛋白磷酸酶1使Mps1失活以确保纺锤体组装检查点有效沉默。
Elife. 2017 May 2;6:e25366. doi: 10.7554/eLife.25366.
3
Expression of Rac1 alternative 3' UTRs is a cell specific mechanism with a function in dendrite outgrowth in cortical neurons.Rac1 替代 3'UTR 的表达是一种细胞特异性机制,在皮质神经元树突生长中具有功能。
Biochim Biophys Acta Gene Regul Mech. 2017 Jun;1860(6):685-694. doi: 10.1016/j.bbagrm.2017.03.002. Epub 2017 Mar 6.
4
UniProt: the universal protein knowledgebase.通用蛋白质知识库:UniProt
Nucleic Acids Res. 2017 Jan 4;45(D1):D158-D169. doi: 10.1093/nar/gkw1099. Epub 2016 Nov 29.
5
PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements.PANTHER 版本 11:来自基因本体论和 Reactome 通路的注释数据扩展,以及数据分析工具增强。
Nucleic Acids Res. 2017 Jan 4;45(D1):D183-D189. doi: 10.1093/nar/gkw1138. Epub 2016 Nov 29.
6
FlyBase at 25: looking to the future.《果蝇数据库25周年:展望未来》
Nucleic Acids Res. 2017 Jan 4;45(D1):D663-D671. doi: 10.1093/nar/gkw1016. Epub 2016 Oct 30.
7
High Throughput Sequencing Identifies Misregulated Genes in the Drosophila Polypyrimidine Tract-Binding Protein (hephaestus) Mutant Defective in Spermatogenesis.高通量测序鉴定出果蝇多聚嘧啶序列结合蛋白(赫菲斯托斯)突变体中在精子发生方面存在缺陷的失调基因。
PLoS One. 2016 Mar 4;11(3):e0150768. doi: 10.1371/journal.pone.0150768. eCollection 2016.
8
Plk1 and Mps1 Cooperatively Regulate the Spindle Assembly Checkpoint in Human Cells.Plk1和Mps1协同调节人类细胞中的纺锤体组装检查点。
Cell Rep. 2015 Jul 7;12(1):66-78. doi: 10.1016/j.celrep.2015.06.007. Epub 2015 Jun 25.
9
Alternative 3' UTRs act as scaffolds to regulate membrane protein localization.可变的3'非翻译区作为支架来调节膜蛋白定位。
Nature. 2015 Jun 18;522(7556):363-7. doi: 10.1038/nature14321. Epub 2015 Apr 20.
10
Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3'-UTR landscape across seven tumour types.RNA测序对可变聚腺苷酸化的动态分析揭示了七种肿瘤类型的3'-非翻译区图谱。
Nat Commun. 2014 Nov 20;5:5274. doi: 10.1038/ncomms6274.

果蝇细胞周期激酶 Polo 受广泛的 3'非翻译区调控序列控制。

Cell Cycle Kinase Polo Is Controlled by a Widespread 3' Untranslated Region Regulatory Sequence in Drosophila melanogaster.

机构信息

Gene Regulation, Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.

Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.

出版信息

Mol Cell Biol. 2019 Jul 16;39(15). doi: 10.1128/MCB.00581-18. Print 2019 Aug 1.

DOI:10.1128/MCB.00581-18
PMID:31085682
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6639250/
Abstract

Alternative polyadenylation generates transcriptomic diversity, although the physiological impact and regulatory mechanisms involved are still poorly understood. The cell cycle kinase Polo is controlled by alternative polyadenylation in the 3' untranslated region (3'UTR), with critical physiological consequences. Here, we characterized the molecular mechanisms required for alternative polyadenylation. We identified a conserved upstream sequence element (USE) close to the proximal poly(A) signal. Transgenic flies without this sequence show incorrect selection of poly(A) signals with consequent downregulation of Polo expression levels and insufficient/defective activation of Polo kinetochore targets Mps1 and Aurora B. Deletion of the USE results in abnormal mitoses in neuroblasts, revealing a role for this sequence We found that Hephaestus binds to the USE RNA and that mutants display defects in alternative polyadenylation concomitant with a striking reduction in Polo protein levels, leading to mitotic errors and aneuploidy. Bioinformatic analyses show that the USE is preferentially localized upstream of noncanonical polyadenylation signals in genes. Taken together, our results revealed the molecular mechanisms involved in alternative polyadenylation, with remarkable physiological functions in Polo expression and activity at the kinetochores, and disclosed a new function for USEs in .

摘要

可变多聚腺苷酸化产生转录组多样性,尽管其涉及的生理影响和调节机制仍知之甚少。细胞周期激酶 Polo 在 3'非翻译区(3'UTR)中通过可变多聚腺苷酸化进行调控,具有关键的生理后果。在这里,我们描述了可变多聚腺苷酸化所需的分子机制。我们确定了一个靠近近端多聚腺苷酸化信号的保守上游序列元件(USE)。没有这个序列的转基因果蝇显示出多聚腺苷酸化信号的选择不正确,导致 Polo 表达水平下调,以及 Polo 动粒靶标 Mps1 和 Aurora B 的激活不足/缺陷。USE 的缺失导致神经母细胞中的异常有丝分裂,揭示了该序列的作用。我们发现 Hephaestus 与 USE RNA 结合,而突变体显示出可变多聚腺苷酸化的缺陷,伴随着 Polo 蛋白水平的显著降低,导致有丝分裂错误和非整倍体。生物信息学分析表明,USE 优先位于基因中非典型多聚腺苷酸化信号的上游。总之,我们的结果揭示了可变多聚腺苷酸化涉及的分子机制,在 Polo 表达和动粒活性方面具有显著的生理功能,并揭示了 USE 在 中的新功能。