Weber Daniel K, Bader Taysir, Larsen Erik K, Wang Songlin, Gopinath Tata, Distefano Mark, Veglia Gianluigi
Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN, United States.
Department of Chemistry, University of Minnesota, Minneapolis, MN, United States.
Methods Enzymol. 2019;621:281-304. doi: 10.1016/bs.mie.2019.02.001. Epub 2019 Mar 8.
Solid-state NMR (ssNMR) is an ideal tool to study structure and dynamics of membrane proteins in their native lipid environment. In principle, ssNMR has no size limitations. However, this feature is rarely exploited as large membrane proteins display severe resonance overlap. In addition, dismal yields from recombinant bacterial expression systems limit severely spectroscopic characterization of membrane proteins. For very large mammalian membrane proteins, extraction from the original organism remains the most viable approach. In this case, NMR-observable nuclei must be introduced post-translationally, but the approaches developed so far are rather scarce. Here, we detail the synthesis and engineering of a reactive C-ethylmethanethiosulfonate (C-EMTS) reagent for the post-translational alkylation of cysteine sidechains of a 110kDa sarcoplasmic reticulum Ca-ATPase (SERCA) extracted from rabbit skeletal muscle tissue. When reconstituted into liposomes, it is possible to resolve the resonances of the engineered ethyl groups by magic-angle spinning (MAS) 2D [C,C]-DARR experiments. Notably, the ethyl-group modification does not perturb the function of SERCA, yielding well-resolved C-C fingerprints that are used to image its structural states in the catalytic cycle and filtering out overwhelming naturally-abundant C nuclei signals arising from the enzyme and lipids. We anticipate that this approach will be used together with F NMR to monitor conformational transitions of enzymes and proteins that are difficult to express recombinantly.
固态核磁共振(ssNMR)是研究膜蛋白在其天然脂质环境中的结构和动力学的理想工具。原则上,ssNMR没有尺寸限制。然而,由于大型膜蛋白存在严重的共振重叠,这一特性很少被利用。此外,重组细菌表达系统的低产量严重限制了膜蛋白的光谱表征。对于非常大的哺乳动物膜蛋白,从原始生物体中提取仍然是最可行的方法。在这种情况下,必须在翻译后引入可被NMR观测到的原子核,但到目前为止开发的方法相当稀少。在这里,我们详细介绍了一种反应性C-乙基甲硫基磺酸盐(C-EMTS)试剂的合成与工程化,该试剂用于对从兔骨骼肌组织中提取的110kDa肌浆网Ca-ATP酶(SERCA)的半胱氨酸侧链进行翻译后烷基化。当重新组装到脂质体中时,通过魔角旋转(MAS)二维[C,C]-DARR实验可以分辨出工程化乙基的共振信号。值得注意的是,乙基修饰不会干扰SERCA的功能,产生分辨率良好的C-C指纹图谱,用于描绘其在催化循环中的结构状态,并滤除来自酶和脂质的压倒性自然丰度C原子核信号。我们预计,这种方法将与F NMR一起用于监测难以重组表达的酶和蛋白质的构象转变。