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C-代谢通量分析揭示了苯酚对……中中心碳代谢的影响。

C-Metabolic Flux Analysis Reveals Effect of Phenol on Central Carbon Metabolism in .

作者信息

Kitamura Sayaka, Toya Yoshihiro, Shimizu Hiroshi

机构信息

Department of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, Osaka, Japan.

出版信息

Front Microbiol. 2019 May 7;10:1010. doi: 10.3389/fmicb.2019.01010. eCollection 2019.

Abstract

Phenol is an important chemical product that can be used in a wide variety of applications, and it is currently produced from fossil resources. Fermentation production of phenol from renewable biomass resources by microorganisms is highly desirable for sustainable development. However, phenol toxicity hampers phenol production in industrial microorganisms such as . In the present study, it was revealed that culturing in the presence of phenol not only decreased growth rate, but also biomass yield. This suggests that phenol affects the carbon flow of the metabolism, but the mechanism is unknown. To investigate the effect of phenol on the flux distribution of central carbon metabolism, C-metabolic flux analysis (C-MFA) was performed on cells grown under different phenol concentrations (0, 0.1, and 0.15%). C-MFA revealed that the TCA cycle flux reduced by 25% increased acetate production from acetyl-CoA by 30% in the presence of 0.1% phenol. This trend of flux changes was emphasized at a phenol concentration of 0.15%. Although the expression level of citrate synthase, which catalyzes the first reaction of the TCA cycle, does not change regardless of phenol concentrations, the enzyme activity assay shows that the reaction was inhibited by phenol. These results suggest that the TCA cycle flux decreased due to phenol inhibition of citrate synthase; therefore, ATP could not be sufficiently produced by respiration, and growth rate decreased. Furthermore, since carbon was lost as acetate due to overflow metabolism, the biomass yield became low in the presence of phenol.

摘要

苯酚是一种重要的化学产品,可用于广泛的应用领域,目前它是由化石资源生产的。通过微生物从可再生生物质资源发酵生产苯酚对于可持续发展非常有必要。然而,苯酚的毒性阻碍了在诸如工业微生物中苯酚的生产。在本研究中,发现 在苯酚存在下培养不仅降低了生长速率,而且降低了生物量产量。这表明苯酚影响代谢的碳流,但机制尚不清楚。为了研究苯酚对中心碳代谢通量分布的影响,对在不同苯酚浓度(0、0.1和0.15%)下生长的细胞进行了C代谢通量分析(C-MFA)。C-MFA显示,在存在0.1%苯酚的情况下,三羧酸循环通量降低了25%,乙酰辅酶A产生的乙酸盐增加了30%。在苯酚浓度为0.15%时,这种通量变化趋势更加明显。尽管催化三羧酸循环第一步反应的柠檬酸合酶的表达水平无论苯酚浓度如何都没有变化,但酶活性测定表明该反应受到苯酚的抑制。这些结果表明,由于苯酚对柠檬酸合酶的抑制,三羧酸循环通量降低;因此,呼吸作用无法充分产生ATP,生长速率降低。此外,由于溢流代谢使碳以乙酸盐的形式流失,在苯酚存在的情况下生物量产量变低。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bb8/6514248/d0f067f7356e/fmicb-10-01010-g001.jpg

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