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法洛四联症患者 TBX20 的 DNA 甲基化状态。

DNA methylation status of TBX20 in patients with tetralogy of Fallot.

机构信息

Children Hospital of Fudan University, Shanghai, 201102, China.

Shanghai Key Laboratory of Birth Defects, Shanghai, 201102, China.

出版信息

BMC Med Genomics. 2019 May 28;12(1):75. doi: 10.1186/s12920-019-0534-3.

Abstract

BACKGROUND

TBX20 plays an important role in heart development; however, its epigenetic regulation in the pathogenesis of tetralogy of Fallot (TOF) remains unclear.

METHODS

The methylation levels of the TBX20 promoter region in the right ventricular myocardial tissues of TOF and control samples were measured by the Sequenom MassARRAY platform. Bisulphite-sequencing PCR (BSP) was used to confirm the TBX20 methylation of CpG sites in cells. Dual-luciferase reporter assays were performed to detect the influence of TBX20 methylation and Sp1 transcription factors on gene activity. An electrophoretic mobility shift assay (EMSA) was used to explore the binding of the Sp1 transcription factor to the TBX20 promoter.

RESULTS

TOF cases had a significantly lower TBX20_M1 methylation level than controls (median methylation: 20.40% vs. 38.73%; p = 0.0047). The Sp1 transcription factor, which binds to Sp1 binding sites in the TBX20_M1 region and promotes TBX20 gene activity, was blocked by the methylation of Sp1 binding sites in normal controls. With decreasing methylation in the TOF cases, the Sp1 transcription factor can bind to its binding site within the TBX20 promoter M1 region and promote TBX20 gene expression.

CONCLUSIONS

Hypomethylation of the TBX20 promoter region was observed in the TOF cases, and the high expression of the TBX20 gene may be caused by activated Sp1 transcription factor binding because of the decreasing methylation at the Sp1 transcription factor binding sites within TBX20_M1.

摘要

背景

TBX20 在心脏发育中发挥重要作用;然而,其在法洛四联症(TOF)发病机制中的表观遗传调控尚不清楚。

方法

通过Sequenom MassARRAY 平台测量 TOF 和对照样本右心室心肌组织中 TBX20 启动子区域的甲基化水平。亚硫酸氢盐测序 PCR(BSP)用于确认细胞中 TBX20 甲基化 CpG 位点。双荧光素酶报告基因检测用于检测 TBX20 甲基化和 Sp1 转录因子对基因活性的影响。电泳迁移率变动分析(EMSA)用于研究 Sp1 转录因子与 TBX20 启动子的结合。

结果

TOF 病例的 TBX20_M1 甲基化水平明显低于对照组(中位数甲基化:20.40%比 38.73%;p=0.0047)。Sp1 转录因子结合 TBX20_M1 区域的 Sp1 结合位点并促进 TBX20 基因活性,在正常对照中被 Sp1 结合位点的甲基化所阻断。随着 TOF 病例甲基化程度的降低,Sp1 转录因子可以结合 TBX20 启动子 M1 区域内的结合位点并促进 TBX20 基因表达。

结论

在 TOF 病例中观察到 TBX20 启动子区域的低甲基化,TBX20 基因的高表达可能是由于 Sp1 转录因子结合位点的甲基化减少,导致 Sp1 转录因子激活。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d94/6540552/b9ab49062ae1/12920_2019_534_Fig1_HTML.jpg

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