Department of Chemistry , University of California Davis , One Shields Avenue , Davis , California 95616 , United States.
J Phys Chem B. 2019 Jun 27;123(25):5265-5273. doi: 10.1021/acs.jpcb.9b04082. Epub 2019 Jun 13.
Respiratory complex I catalyzes two-electron/two-proton reduction of a ubiquinone (Q) substrate bound at its Q-binding pocket; upon reduction, ubiquinole carries electrons further down the electron transport chain. The mechanism of this two-electron transfer reaction is poorly understood. Here we consider a hypothetical scheme in which two electrons transfer together with two protons in a concerted fashion. On one side, a coupled electron/proton transfer occurs from the reduced N2 FeS cluster and protonated His residue, respectively, while on the other side a hydrogen atom transfer occurs from the neutral Tyr residue, generating a tyrosyl radical. A method to evaluate the coupling matrix element that corresponds to a concerted tunneling of two electrons was developed. Overall, our calculations indicate that the concerted reaction is feasible, in which case a transient tyrosyl radical is formed during the catalytic cycle of the enzyme.
呼吸复合物 I 在其 Q 结合口袋中催化与 ubiquinone(Q)结合的底物的两电子/两质子还原;还原后, ubiquinole 将电子进一步传递到电子传递链中。这种两电子转移反应的机制尚未完全理解。在这里,我们考虑了一种假设方案,其中两个电子与两个质子协同转移。在一侧,分别从还原的 N2 FeS 簇和质子化的 His 残基发生耦合电子/质子转移,而在另一侧,从中性 Tyr 残基发生氢原子转移,生成酪氨酸自由基。开发了一种评估对应于两个电子协同隧穿的耦合矩阵元的方法。总的来说,我们的计算表明协同反应是可行的,在这种情况下,酶催化循环中会形成瞬态酪氨酸自由基。