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从降解的岩骨中获取全基因组 DNA,并评估法医学案例的性别和可能的地理来源。

Genome-Wide DNA from Degraded Petrous Bones and the Assessment of Sex and Probable Geographic Origins of Forensic Cases.

机构信息

School of Archaeology and Earth Institute, University College of Dublin, Dublin 4, Belfield, Ireland.

Department of Evolutionary Anthropology, University of Vienna, Althanstraße 14 1090, Wien, Austria.

出版信息

Sci Rep. 2019 Jun 3;9(1):8226. doi: 10.1038/s41598-019-44638-w.

DOI:10.1038/s41598-019-44638-w
PMID:31160682
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6547751/
Abstract

The acquisition of biological information and assessment of the most probable geographic origin of unidentified individuals for obtaining positive identification is central in forensic sciences. Identification based on forensic DNA, however, varies greatly in relation to degradation of DNA. Our primary aim is to assess the applicability of a petrous bone sampling method in combination with Next Generation Sequencing to evaluate the quality and quantity of DNA in taphonomically degraded petrous bones from forensic and cemetery cases. A related aim is to analyse the genomic data to obtain the molecular sex of each individual, and their most probable geographic origin. Six of seven subjects were previously identified and used for comparison with the results. To analyse their probable geographic origin, samples were genotyped for the 627.719 SNP positions. Results show that the inner ear cochlear region of the petrous bone provides good percentages of endogenous DNA (14.61-66.89%), even in the case of burnt bodies. All comparisons between forensic records and genetic results agree (sex) and are compatible (geographic origin). The application of the proposed methodology may be a powerful tool for use in forensic scenarios, ranging from missing persons to unidentified migrants who perish when crossing borders.

摘要

在法医学中,获取生物信息并评估身份不明个体的最可能地理来源以进行身份识别是至关重要的。然而,基于法医 DNA 的识别在很大程度上因 DNA 降解而有所不同。我们的主要目的是评估岩骨取样方法与下一代测序相结合的适用性,以评估法医学和墓地案例中经历尸骸降解的岩骨中的 DNA 质量和数量。另一个相关目标是分析基因组数据,以获得每个个体的分子性别及其最可能的地理来源。之前已经确定了其中的 6 个个体,并将其用于与结果进行比较。为了分析他们的可能地理来源,对样本进行了 627,719 个 SNP 位置的基因分型。结果表明,即使是在烧焦的尸体中,岩骨的内耳耳蜗区域也能提供良好的内源性 DNA 百分比(14.61-66.89%)。所有法医学记录与遗传结果之间的比较(性别)都是一致的,并且是相容的(地理来源)。所提出方法的应用可能是法医场景中一种强大的工具,可用于从失踪人员到在越境时死亡的身份不明移民等各种情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/a5ffcd9330f1/41598_2019_44638_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/139d519afe62/41598_2019_44638_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/7566a2d5dc34/41598_2019_44638_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/a879fa6a549f/41598_2019_44638_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/a5ffcd9330f1/41598_2019_44638_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/139d519afe62/41598_2019_44638_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/7566a2d5dc34/41598_2019_44638_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/a879fa6a549f/41598_2019_44638_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/070e/6547751/a5ffcd9330f1/41598_2019_44638_Fig4_HTML.jpg

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