The East Coast Research Institute of Life Science, Gangneung-Wonju National University, Gangneung 25457, South Korea.
Department of Marine Biotechnology, Gangneung-Wonju National University, Gangneung 25457, South Korea.
Int J Biol Macromol. 2019 Aug 15;135:1193-1201. doi: 10.1016/j.ijbiomac.2019.06.036. Epub 2019 Jun 7.
In this study, we determined the complete mitochondrial genome (mt genome) of Semisulcospira gottschei for the first time and then compared it with the mt genome of species belonging to Cerithioidea. The mt genome consists of 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs) and non-coding region with a total length of 16,101 bp. The type of constitutive genes and the direction of the coding strand which appeared in the mt genome were the same as the ones observed in Cerithioidea except for the tRNA-Q and tRNA-R positions. The S. gottschei mt genome had a non-coding region with an AT-rich loop between tRNA-F and tRNA-C regions. In regard to molecular phylogeny, two types of analysis were performed to confirm the introgressive hybridization of S. gottschei and to identify the phylogenetic location among the species in Caenogastropoda. As a result, S. gottschei used in this study belonged to the same clade as other non-introgressed S. gottschei. As for the molecular phylogenic analysis of species belonging to Caenogastropoda, S. gottschei was found to be the closest to S. coreana taxonomically and to be included in Cerithioidea.
在这项研究中,我们首次确定了方格玛瑙螺的完整线粒体基因组(mt 基因组),并将其与属于 Cerithioidea 的物种的 mt 基因组进行了比较。mt 基因组由 13 个蛋白编码基因(PCGs)、2 个核糖体 RNA(rRNA)、22 个转移 RNA(tRNA)和非编码区组成,总长度为 16101bp。组成型基因的类型和编码链的方向与 Cerithioidea 中观察到的相同,除了 tRNA-Q 和 tRNA-R 位置。S. gottschei mt 基因组在 tRNA-F 和 tRNA-C 区域之间具有富含 AT 的非编码区环。在分子系统发育方面,进行了两种类型的分析,以确认 S. gottschei 的渗入杂交,并确定 Caenogastropoda 物种中的系统发育位置。结果表明,本研究中使用的 S. gottschei 与其他未渗入的 S. gottschei 属于同一进化枝。对于属于 Caenogastropoda 的物种的分子系统发育分析,S. gottschei 在分类上与 S. coreana 最为接近,并被归入 Cerithioidea。