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AlkB 同系物 1 使哺乳动物 mRNA 中的 -甲基胞嘧啶脱甲基化。

AlkB Homologue 1 Demethylates -Methylcytidine in mRNA of Mammals.

机构信息

Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), Department of Chemistry , Wuhan University , Wuhan 430072 , P.R. China.

Sauvage Center for Molecular Sciences , Wuhan University , Wuhan 430072 , P.R. China.

出版信息

ACS Chem Biol. 2019 Jul 19;14(7):1418-1425. doi: 10.1021/acschembio.8b01001. Epub 2019 Jun 24.

Abstract

RNA contains diverse modifications that exert important influences in a variety of cellular processes. So far more than 150 modifications have been identified in various RNA species, mainly in rRNA and tRNA. Recent research advances in RNA modifications have been sparked by the discovery of dynamic and reversible modifications in mRNA. Moving beyond the abundant tRNA and rRNA to mRNA is opening new directions in understanding RNA modification-mediated regulation of gene expression. Recently, it was reported that -methylcytidine (mC) existed in mRNA of mammalian cells, and methyltransferase-like 8 (METTL8) was identified to be the writer enzyme of mC. However, little is known about the eraser enzyme of mC in mRNA. In the current study, we found that the AlkB homologue 1 (ALKBH1) was capable of demethylating mC in mRNA of mammalian cells . Overexpression and knockdown of ALKBH1 in cultured human cells can induce decrease and increase of the level of mC in mRNA, respectively, revealing the eraser enzyme property of ALKBH1 on mC in mRNA. In addition, we observed significant decrease of the level of mC in mRNA in hepatocellular carcinoma (HCC) tissues compared to tumor-adjacent normal tissues, which could be attributed to the increased expression of as well as the decreased expression of in HCC tissues. These results indicated that mC in mRNA may play certain roles in tumorigenesis. Our study shed light on understanding the demethylation of mC in mRNA.

摘要

RNA 含有多种修饰,这些修饰在各种细胞过程中发挥着重要的影响。到目前为止,已经在各种 RNA 物种中鉴定出了 150 多种修饰,主要在 rRNA 和 tRNA 中。最近,在 mRNA 中发现了动态和可逆修饰,这一发现激发了 RNA 修饰研究的新进展。超越丰富的 tRNA 和 rRNA 到 mRNA,正在为理解 RNA 修饰介导的基因表达调控开辟新的方向。最近,有报道称 -甲基胞嘧啶(mC)存在于哺乳动物细胞的 mRNA 中,并且鉴定出甲基转移酶样 8(METTL8)是 mC 的写入酶。然而,对于 mC 在 mRNA 中的擦除酶知之甚少。在本研究中,我们发现 AlkB 同源物 1(ALKBH1)能够在哺乳动物细胞的 mRNA 中去甲基化 mC。在培养的人类细胞中过表达和敲低 ALKBH1 分别可以诱导 mRNA 中 mC 水平的降低和增加,揭示了 ALKBH1 对 mRNA 中 mC 的擦除酶特性。此外,我们观察到肝癌(HCC)组织中 mRNA 中 mC 的水平与肿瘤相邻的正常组织相比显著降低,这可能归因于在 HCC 组织中 表达增加以及 表达减少。这些结果表明,mRNA 中的 mC 可能在肿瘤发生中发挥一定作用。我们的研究揭示了理解 mC 在 mRNA 中去甲基化的机制。

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