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用于单分子定位和追踪的肌球蛋白V荧光成像数据集

Myosin V fluorescence imaging dataset for single-molecule localization and tracking.

作者信息

Gardini Lucia, Arbore Claudia, Pavone Francesco Saverio, Capitanio Marco

机构信息

LENS - European Laboratory for Non-linear Spectroscopy, Via Nello Carrara 1, 50019 Sesto Fiorentino, Italy.

National Institute of Optics-National Research Council, Largo Fermi 6, 50125 Florence, Italy.

出版信息

Data Brief. 2019 May 23;25:103973. doi: 10.1016/j.dib.2019.103973. eCollection 2019 Aug.

Abstract

Myosin-5B is one of three members of the myosin-5 family of actin-based molecular motors fundamental in recycling endosome trafficking and collective actin network dynamics. Through single-molecule motility assays, we recently demonstrated that myosin-5B can proceed in 36-nm steps along actin filaments as single motor. By analyzing trajectories of single myosin-5B along actin filaments we showed that its velocity is dependent on ATP concentration, while its run length is independent on ATP concentration, as a landmark of processivity. Here, we share image stacks acquired under total internal reflection fluorescence (TIRF) microscopy and representative trajectories of single myosin-5B molecules labelled with Quantum Dots (QD-myo-5B) moving along actin filaments at different ATP concentrations (0.3-1000 μM). Localization of QD-myo-5B was performed with the PROOF software, which is freely available [1]. The data can be valuable for researchers interested in molecular motors motility, both from an experimental and modeling point of view, as well as to researchers developing single particle tracking algorithms. The data is related to the research article "Dissecting myosin-5B mechanosensitivity and calcium regulation at the single molecule level" Gardini et al., 2015.

摘要

肌球蛋白-5B是基于肌动蛋白的分子马达肌球蛋白-5家族的三个成员之一,在回收内体运输和肌动蛋白网络集体动力学中起着重要作用。通过单分子运动分析,我们最近证明肌球蛋白-5B可以作为单个马达沿着肌动蛋白丝以36纳米的步长前进。通过分析单个肌球蛋白-5B沿肌动蛋白丝的轨迹,我们发现其速度取决于ATP浓度,而其运行长度与ATP浓度无关,这是持续性的一个标志。在这里,我们分享了在全内反射荧光(TIRF)显微镜下获得的图像堆栈,以及在不同ATP浓度(0.3 - 1000μM)下沿着肌动蛋白丝移动的用量子点标记的单个肌球蛋白-5B分子(QD-myo-5B)的代表性轨迹。QD-myo-5B的定位是使用免费提供的PROOF软件进行的[1]。从实验和建模的角度来看,这些数据对于对分子马达运动感兴趣的研究人员以及开发单粒子跟踪算法的研究人员可能是有价值的。这些数据与研究文章《在单分子水平剖析肌球蛋白-5B的机械敏感性和钙调节》相关,作者是加迪尼等人,发表于2015年。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3dd1/6552026/45a781267377/gr1.jpg

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