Laboratory of Thermodynamics, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany.
Laboratory of Thermodynamics, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany.
Biophys Chem. 2019 Sep;252:106209. doi: 10.1016/j.bpc.2019.106209. Epub 2019 Jun 20.
Thermodynamics and kinetics of biochemical reactions depend not only on temperature, but also on pressure and on the presence of cosolvents in the reaction medium. Understanding their effects on biochemical processes is a crucial step towards the design and optimization of industrially relevant enzymatic reactions. Such reactions typically do not take place in pure water. Cosolvents might be present as they are either required as stabilizer, as solubilizer, or in their function to overcome thermodynamic or kinetic limitations. Further, a vast number of enzymes has been found to be piezophilic or at least pressure-tolerant, meaning that nature has adapted them to high-pressure conditions. In this manuscript, we review existing data and we additionally present some new data on the combined cosolvent and pressure influence on the kinetics of biochemical reactions. In particular, we focus on cosolvent and pressure effects on Michaelis constants and catalytic constants of α-CT-catalysed peptide hydrolysis reactions. Two different substrates were considered in this work, N-succinyl-L-phenylalanine-p-nitroanilide and H-phenylalanine-p-nitroanilide. Urea, trimethyl-N-amine oxide, and dimethyl sulfoxide have been under investigation as these cosolvents are often applied in technical as well as in demonstrator systems. Pressure effects have been studied from ambient pressure up to 2 kbar. The existing literature data and the new data show that pressure and cosolvents must not be treated as independent effects. Non-additive interactions on a molecular level lead to a partially compensatory effect of cosolvents and pressure on the kinetic parameters of the hydrolysis reactions considered.
生物化学反应的热力学和动力学不仅取决于温度,还取决于压力以及反应介质中助溶剂的存在。了解它们对生化过程的影响是设计和优化工业相关酶反应的关键步骤。此类反应通常不会在纯水中发生。助溶剂可能存在,因为它们要么作为稳定剂,要么作为增溶剂,或者在克服热力学或动力学限制方面发挥作用。此外,已经发现大量的酶具有压敏性或至少耐高压性,这意味着自然界已经使它们适应了高压环境。在本文中,我们回顾了现有数据,并另外介绍了一些关于生物化学反应的动力学受助溶剂和压力综合影响的新数据。特别是,我们重点研究了助溶剂和压力对 α-CT 催化的肽水解反应的米氏常数和催化常数的影响。在这项工作中考虑了两种不同的底物,N-琥珀酰-L-苯丙氨酸对硝基苯胺和 H-苯丙氨酸对硝基苯胺。由于这些助溶剂经常应用于技术和示范系统中,因此研究了尿素、三甲基-N-氧化胺和二甲基亚砜。已经从环境压力研究到 2 kbar 进行了压力影响的研究。现有文献数据和新数据表明,压力和助溶剂不能被视为独立的影响。在分子水平上的非加性相互作用导致助溶剂和压力对所考虑的水解反应动力学参数产生部分补偿效应。