Biotechnology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran. Student Research Committee and Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran.
J Pharm Pharm Sci. 2019;22(1):247-269. doi: 10.18433/jpps30271.
Modeling of physicochemical and pharmacokinetic properties is important for the prediction and mechanism characterization in drug discovery and development. Biopharmaceutics Drug Disposition Classification System (BDDCS) is a four-class system based on solubility and metabolism. This system is employed to delineate the role of transporters in pharmacokinetics and their interaction with metabolizing enzymes. It further anticipates drug disposition and potential drug-drug interactions in the liver and intestine. According to BDDCS, drugs are classified into four groups in terms of the extent of metabolism and solubility (high and low). In this study, structural parameters of drugs were used to develop classification-based models for the prediction of BDDCS class. Reported BDDCS data of drugs were collected from the literature, and structural descriptors (Abraham solvation parameters and octanol-water partition coefficient (log P)) were calculated by ACD/Labs software. Data were divided into training and test sets. Classification-based models were then used to predict the class of each drug in BDDCS system using structural parameters and the validity of the established models was evaluated by an external test set. The results of this study showed that log P and Abraham solvation parameters are able to predict the class of solubility and metabolism in BDDCS system with good accuracy. Based on the developed methods for prediction solubility and metabolism class, BDDCS could be predicted in the correct with an acceptable accuracy. Structural properties of drugs, i.e. logP and Abraham solvation parameters (polarizability, hydrogen bonding acidity and basicity), are capable of estimating the class of solubility and metabolism with an acceptable accuracy.
物理化学和药代动力学性质的建模对于药物发现和开发中的预测和机制表征非常重要。生物药剂学药物处置分类系统(BDDCS)是一个基于溶解度和代谢的四分类系统。该系统用于描绘转运体在药代动力学中的作用及其与代谢酶的相互作用。它进一步预测了肝脏和肠道中药物的处置和潜在的药物相互作用。根据 BDDCS,药物根据代谢和溶解度(高和低)的程度分为四组。在这项研究中,使用药物的结构参数来开发基于分类的模型,以预测 BDDCS 类。从文献中收集了报告的药物 BDDCS 数据,并通过 ACD/Labs 软件计算了结构描述符(Abraham 溶剂化参数和辛醇-水分配系数(log P))。数据分为训练集和测试集。然后使用基于分类的模型使用结构参数预测 BDDCS 系统中每种药物的类别,并通过外部测试集评估建立模型的有效性。该研究的结果表明,log P 和 Abraham 溶剂化参数能够以良好的准确性预测 BDDCS 系统中的溶解度和代谢类别。基于预测溶解度和代谢类别的开发方法,BDDCS 可以以可接受的准确性进行正确预测。药物的结构特性,即 logP 和 Abraham 溶剂化参数(极化率、氢键酸度和碱度),能够以可接受的准确性估计溶解度和代谢类别。