State Key Laboratory for Conservation & Utilization of Subtropical Agro-bioresources, College of Animal Science & Technology, Guangxi University, Nanning 530004, PR China.
Department of Medicine-Endocrinology, Baylor College of Medicine, Houston, TX 77030, USA.
Epigenomics. 2019 Aug;11(11):1267-1282. doi: 10.2217/epi-2019-0009. Epub 2019 Jul 10.
To assess the mA methylome in mouse fatty liver induced by a high-fat diet (HFD). MeRIP-seq was performed to identify differences in the mA methylomes between the normal liver and fatty liver induced by an HFD. As compared with the control group, the upmethylated coding genes upon feeding an HFD were primarily enriched in processes associated with lipid metabolism, while genes with downmethylation were enriched in processes associated with metabolism and translation. Furthermore, many RNA-binding proteins that potentially bind to differentially methylated mA sites were mainly annotated in processes of RNA splicing. These findings suggest that differential mA methylation may act on functional genes through RNA-binding proteins to regulate the metabolism of lipids in fatty liver disease.
评估高脂肪饮食(HFD)诱导的小鼠脂肪肝中的 mA 甲基组。通过 MeRIP-seq 鉴定正常肝脏和 HFD 诱导的脂肪肝之间 mA 甲基组的差异。与对照组相比,HFD 喂养后上调甲基化的编码基因主要富集在与脂质代谢相关的过程中,而下调甲基化的基因则富集在与代谢和翻译相关的过程中。此外,许多可能与差异甲基化 mA 位点结合的 RNA 结合蛋白主要注释在 RNA 剪接过程中。这些发现表明,差异的 mA 甲基化可能通过 RNA 结合蛋白作用于功能基因,调节脂肪肝中的脂质代谢。