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巴西帕拉伊巴州牛群中与牛疱疹病毒1型(BoHV-1)感染相关的群体水平患病率和风险因素的贝叶斯估计。

Bayesian estimation of herd-level prevalence and risk factors associated with BoHV-1 infection in cattle herds in the State of Paraíba, Brazil.

作者信息

Fernandes Leíse Gomes, Denwood Matthew James, de Sousa Américo Batista Santos Carolina, Alves Clebert José, Pituco Edviges Maristela, de Campos Nogueira Romaldini Adriana Hellmeister, De Stefano Eliana, Nielsen Søren Saxmose, de Azevedo Sérgio Santos

机构信息

Academic Unit of Veterinary Medicine, Center of Rural Technology and Health, Federal University of Campina Grande, 58700-970 Patos, PB, Brazil.

Department of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, 1870 Frederiksberg C, Denmark.

出版信息

Prev Vet Med. 2019 Aug 1;169:104705. doi: 10.1016/j.prevetmed.2019.104705. Epub 2019 May 29.

Abstract

A cross-sectional study was carried out to estimate the animal- and herd-level prevalence of bovine herpesvirus 1 (BoHV-1) infection in cattle in the State of Paraíba, and to identify risk factors associated with herd-level infection. The state was divided into three sampling strata, and for each stratum, the prevalence of herds infected with BoHV-1 was estimated through a two-stage sampling survey carried out from September 2012 to January 2013. In total, 2443 animals were sampled from 478 herds. A virus-neutralization test was used for BoHV-1 antibody detection. A Bayesian latent-class model was used to describe the data, taking into account imperfect diagnostic test characteristics and the non-independence of test results from animals within the same herd, and using a dynamic within-model risk factor selection method based on indicator variable selection. The adjusted herd-level prevalence was estimated to be 84% (95% CI: 80-88%) for the State of Paraíba, and the animal-level prevalence was estimated to be 73% (95% CI: 66-84%). Only five of the available risk factors were used by the model, with the three most influential being disposal of aborted foetuses (3.78, 95% CI: 1.11-13.85), sharing resources with other farms (3.0, 95% CI: 1.1-8,6), and a herd size of > 23 animals (2.5, 95% CI: 1.1-6.0). Our findings suggest that the animal- and herd-level seroprevalence of BoHV-1 infection in the State of Paraíba is high. While some risk factors such as herd size and sharing resources were identified as risk factors for BoHV-1 infection, these risk factors are initially likely to be of only minor relevance in a control programme due to the extremely high prevalence of infected farms. However, the results are relevant to the risk of reintroduction of disease on farms that have previously eradicated the disease.

摘要

开展了一项横断面研究,以估计帕拉伊巴州牛群中牛疱疹病毒1型(BoHV-1)感染在动物个体和畜群层面的流行率,并确定与畜群层面感染相关的风险因素。该州被划分为三个抽样层次,对于每个层次,通过2012年9月至2013年1月进行的两阶段抽样调查来估计感染BoHV-1的畜群的流行率。总共从478个畜群中抽取了2443头动物。采用病毒中和试验检测BoHV-1抗体。使用贝叶斯潜在类别模型来描述数据,考虑到诊断测试特性不完善以及同一畜群内动物测试结果的非独立性,并使用基于指标变量选择的动态模型内风险因素选择方法。估计帕拉伊巴州畜群层面的校正流行率为84%(95%置信区间:80 - 88%),动物个体层面的流行率估计为73%(95%置信区间:66 - 84%)。该模型仅使用了五个可用的风险因素,其中最具影响力的三个因素是流产胎儿的处理(3.78,95%置信区间:1.11 - 13.85)、与其他农场共享资源(3.0,95%置信区间:1.1 - 8.6)以及畜群规模大于23头动物(2.5,95%置信区间:1.1 - 6.0)。我们的研究结果表明,帕拉伊巴州BoHV-1感染在动物个体和畜群层面的血清流行率很高。虽然一些风险因素如畜群规模和共享资源被确定为BoHV-1感染的风险因素,但由于感染农场的流行率极高,这些风险因素在控制计划中最初可能仅具有较小的相关性。然而,这些结果与先前已根除该疾病的农场疾病重新引入的风险相关。

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