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枯草芽孢杆菌 RecA 与 RadA/Sms 相互作用并加载 RadA/Sms,以在自然染色体转化过程中解旋重组中间体。

Bacillus subtilis RecA interacts with and loads RadA/Sms to unwind recombination intermediates during natural chromosomal transformation.

机构信息

Department of Microbial Biotechnology, Centro Nacional de Biotecnología, CNB-CSIC, 28049 Madrid, Spain.

出版信息

Nucleic Acids Res. 2019 Sep 26;47(17):9198-9215. doi: 10.1093/nar/gkz647.

DOI:10.1093/nar/gkz647
PMID:31350886
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6755099/
Abstract

During natural transformation Bacillus subtilis RecA, polymerized onto the incoming single-stranded (ss) DNA, catalyses DNA strand invasion resulting in a displacement loop (D-loop) intermediate. A null radA mutation impairs chromosomal transformation, and RadA/Sms unwinds forked DNA in the 5'→3' direction. We show that in the absence of RadA/Sms competent cells require the RecG translocase for natural chromosomal transformation. RadA/Sms tetracysteine motif (C13A and C13R) variants, which fail to interact with RecA, are also deficient in plasmid transformation, but this defect is suppressed by inactivating recA. The RadA/Sms C13A and C13R variants bind ssDNA, and this interaction stimulates their ATPase activity. Wild-type (wt) RadA/Sms interacts with and inhibits the ATPase activity of RecA, but RadA/Sms C13A fails to do it. RadA/Sms and its variants, C13A and C13R, bound to the 5'-tail of a DNA substrate, unwind DNA in the 5'→3' direction. RecA interacts with and loads wt RadA/Sms to promote unwinding of a non-cognate 3'-tailed or 5'-fork DNA substrate, but RadA/Sms C13A or C13R fail to do it. We propose that wt RadA/Sms interaction with RecA is crucial to recruit the former onto D-loop DNA, and both proteins in concert catalyse D-loop extension to favour integration of ssDNA during chromosomal transformation.

摘要

在自然转化过程中,枯草芽孢杆菌 RecA 聚合到进入的单链 (ss) DNA 上,催化 DNA 链入侵,导致产生一个置换环 (D-loop) 中间体。RadA 缺失突变会损害染色体转化,而 RadA/Sms 以 5'→3'的方向解开分叉 DNA。我们表明,在没有 RadA/Sms 的情况下,有活性的 RecG 转位酶对于自然染色体转化是必需的。RadA/Sms 四半胱氨酸基序 (C13A 和 C13R) 变体无法与 RecA 相互作用,也不能转化质粒,但这一缺陷可以通过失活 recA 来抑制。RadA/Sms C13A 和 C13R 变体可以结合 ssDNA,并且这种相互作用可以刺激它们的 ATP 酶活性。野生型 (wt) RadA/Sms 与 RecA 相互作用并抑制其 ATP 酶活性,但 RadA/Sms C13A 则不能。RadA/Sms 及其变体 C13A 和 C13R 与 DNA 底物的 5'-尾结合,以 5'→3'的方向解开 DNA。RecA 与 wt RadA/Sms 相互作用并加载后者以促进非同源 3'-尾或 5'-叉 DNA 底物的解旋,但 RadA/Sms C13A 或 C13R 则不能。我们提出,wt RadA/Sms 与 RecA 的相互作用对于将前者招募到 D-loop DNA 上至关重要,并且这两种蛋白协同作用催化 D-loop 延伸,以促进 ssDNA 在染色体转化过程中的整合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/1a1a0f36c967/gkz647fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/54f1d1e6a1cb/gkz647fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/2fdbd61be0e1/gkz647fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/64a8f7b5a28f/gkz647fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/53bc6a31fabb/gkz647fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/935b10fd45e3/gkz647fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/1a1a0f36c967/gkz647fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/54f1d1e6a1cb/gkz647fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/2fdbd61be0e1/gkz647fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/64a8f7b5a28f/gkz647fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/53bc6a31fabb/gkz647fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/935b10fd45e3/gkz647fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2712/6755099/1a1a0f36c967/gkz647fig6.jpg

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2
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DNA Repair (Amst). 2019 May;77:45-57. doi: 10.1016/j.dnarep.2019.03.002. Epub 2019 Mar 4.
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FEMS Microbiol Rev. 2024 Jan 12;48(1). doi: 10.1093/femsre/fuad065.
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Plant Organellar MSH1 Is a Displacement Loop-Specific Endonuclease.植物细胞器 MSH1 是一种置换环特异性内切核酸酶。
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9
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