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造血干细胞移植患者中星状病毒MLB2的多样变体以及该病毒的进化速率和模式

Diversified Variants of Astrovirus MLB2 in Patients Following Hematopoietic Stem Cell Transplantation and the Evolutionary Rates and Patterns of the Virus.

作者信息

Guo Ke, Li Li-Li, Zhang Qing, Yu Jie-Mei, Ye Yan

机构信息

Department of Immunology, School of Basic Medical Sciences, Anhui Medical University, Hefei, China.

Department of Diarrhea, National Institute for Viral Disease Control and Prevention, China CDC, Beijing, China.

出版信息

Evol Bioinform Online. 2019 Jul 16;15:1176934319864922. doi: 10.1177/1176934319864922. eCollection 2019.

DOI:10.1177/1176934319864922
PMID:31360058
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6637835/
Abstract

We assessed the quasispecies heterogeneity of a human astrovirus MLB2 (HAstV-MLB2-YJMGK) in immunocompromised patients following hematopoietic stem cell transplantation and performed genetic and evolutionary analyses of HAstV isolates circulating worldwide. The result showed that the virus had diversified variants and a strong positive selection in the patient, indicating that such patients may be a reservoir for astrovirus. The time to the most recent common ancestor of MLB2 and classic HAstVs was around 1800 years, and it has a decline in effective population size of HAstVs in the late 100 years.

摘要

我们评估了造血干细胞移植后免疫功能低下患者中人类星状病毒MLB2(HAstV-MLB2-YJMGK)的准种异质性,并对全球流行的HAstV分离株进行了遗传和进化分析。结果显示,该病毒在患者体内具有多样化的变异体且存在强烈的正选择,表明此类患者可能是星状病毒的储存宿主。MLB2与经典HAstV的最近共同祖先时间约为1800年,且在过去100年中HAstV的有效种群大小有所下降。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/859bebed7632/10.1177_1176934319864922-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/1d3c61adad4f/10.1177_1176934319864922-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/422dab4275b9/10.1177_1176934319864922-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/6c6380284207/10.1177_1176934319864922-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/859bebed7632/10.1177_1176934319864922-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/1d3c61adad4f/10.1177_1176934319864922-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/422dab4275b9/10.1177_1176934319864922-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/6c6380284207/10.1177_1176934319864922-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0fe5/6637835/859bebed7632/10.1177_1176934319864922-fig4.jpg

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本文引用的文献

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Detection of novel astroviruses MLB1 and MLB2 in the sera of febrile Tanzanian children.在发热的坦桑尼亚儿童血清中检测新型星状病毒MLB1和MLB2。
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Astrovirus MLB2, a New Gastroenteric Virus Associated with Meningitis and Disseminated Infection.星状病毒MLB2,一种与脑膜炎和播散性感染相关的新型胃肠病毒。
Emerg Infect Dis. 2016 May;22(5):846-53. doi: 10.3201/eid2205.151807.
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Norovirus infection in pediatric hematopoietic stem cell transplantation recipients: incidence, risk factors, and outcome.儿童造血干细胞移植受者诺如病毒感染:发生率、危险因素和结局。
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