• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

有效减少外科病理学报告缺陷的计算算法

Computational Algorithms that Effectively Reduce Report Defects in Surgical Pathology.

作者信息

Ye Jay J, Tan Michael R

机构信息

Dahl-Chase Pathology Associates, Bangor, Maine, USA.

出版信息

J Pathol Inform. 2019 Jul 1;10:20. doi: 10.4103/jpi.jpi_17_19. eCollection 2019.

DOI:10.4103/jpi.jpi_17_19
PMID:31367472
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6639849/
Abstract

BACKGROUND

Pathology report defects refer to errors in the pathology reports, such as transcription/voice recognition errors and incorrect nondiagnostic information. Examples of the latter include incorrect gender, incorrect submitting physician, incorrect description of tissue blocks submitted, report formatting issues, and so on. Over the past 5 years, we have implemented computational algorithms to identify and correct these report defects.

MATERIALS AND METHODS

Report texts, tissue blocks submitted, and other relevant information are retrieved from the pathology information system database. Two complementary algorithms are used to identify the voice recognition errors by parsing the gross description texts to either (i) identify previously encountered error patterns or (ii) flag sentences containing previously-unused two-word sequences (bigrams). A third algorithm based on identifying conflicting information from two different sources is used to identify tissue block designation errors in the gross description; the information on actual block submission is compared with the block designation information parsed from the gross description text.

RESULTS

The computational algorithms identify voice recognition errors in approximately 8%-10% of the cases and block designation errors in approximately 0.5%-1% of all the cases.

CONCLUSIONS

The algorithms described here have been effective in reducing pathology report defects. In addition to detecting voice recognition and block designation errors, these algorithms have also be used to detect other report defects, such as wrong gender, wrong provider, special stains or immunostains performed but not reported, and so on.

摘要

背景

病理报告缺陷是指病理报告中的错误,如转录/语音识别错误以及不正确的非诊断性信息。后者的例子包括性别错误、提交医生错误、提交组织块的描述错误、报告格式问题等。在过去5年中,我们实施了计算算法来识别和纠正这些报告缺陷。

材料与方法

从病理信息系统数据库中检索报告文本、提交的组织块及其他相关信息。使用两种互补算法,通过解析大体描述文本以识别语音识别错误,方法如下:(i)识别先前遇到的错误模式,或(ii)标记包含先前未使用的双词序列(双连词)的句子。第三种算法基于识别来自两个不同来源的冲突信息,用于识别大体描述中的组织块指定错误;将实际提交块的信息与从大体描述文本中解析出的块指定信息进行比较。

结果

计算算法在大约8%-10%的病例中识别出语音识别错误,在所有病例的大约0.5%-1%中识别出块指定错误。

结论

本文所述算法在减少病理报告缺陷方面已见成效。除了检测语音识别和块指定错误外,这些算法还可用于检测其他报告缺陷,如性别错误、提供者错误、已进行但未报告的特殊染色或免疫染色等。

相似文献

1
Computational Algorithms that Effectively Reduce Report Defects in Surgical Pathology.有效减少外科病理学报告缺陷的计算算法
J Pathol Inform. 2019 Jul 1;10:20. doi: 10.4103/jpi.jpi_17_19. eCollection 2019.
2
Mislabeling of cases, specimens, blocks, and slides: a college of american pathologists study of 136 institutions.病例、标本、组织块和切片的标签错误:美国病理学家学会对 136 家机构的研究。
Arch Pathol Lab Med. 2011 Aug;135(8):969-74. doi: 10.5858/2010-0726-CPR.
3
Improving Radiology Report Quality by Rapidly Notifying Radiologist of Report Errors.通过快速通知放射科医生报告错误来提高放射学报告质量。
J Digit Imaging. 2015 Aug;28(4):492-8. doi: 10.1007/s10278-015-9781-9.
4
[Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].[通过新型人类基因的电子克隆和实验验证对NCBI人类基因数据库中出现的模型参考序列的一些错误进行分析、鉴定和校正]
Yi Chuan Xue Bao. 2004 May;31(5):431-43.
5
Laterality errors in radiology reports generated with and without voice recognition software: frequency and clinical significance.使用和不使用语音识别软件生成的放射学报告中的左右侧偏差:频率和临床意义。
J Am Coll Radiol. 2013 Jul;10(7):538-43. doi: 10.1016/j.jacr.2013.02.017.
6
Internal quality assurance activities of a surgical pathology department in an Australian teaching hospital.澳大利亚一家教学医院外科病理科的内部质量保证活动。
J Clin Pathol. 1998 Sep;51(9):695-9. doi: 10.1136/jcp.51.9.695.
7
The utility and cost effectiveness of voice recognition technology in surgical pathology.语音识别技术在外科病理学中的实用性和成本效益。
Mod Pathol. 2002 May;15(5):565-71. doi: 10.1038/modpathol.3880564.
8
Frequency and analysis of non-clinical errors made in radiology reports using the National Integrated Medical Imaging System voice recognition dictation software.使用国家综合医学成像系统语音识别听写软件的放射学报告中非临床错误的频率及分析
Ir J Med Sci. 2016 Nov;185(4):921-927. doi: 10.1007/s11845-016-1507-6. Epub 2016 Oct 1.
9
Specimen labeling errors in surgical pathology: an 18-month experience.手术病理学标本标签错误:18 个月的经验。
Am J Clin Pathol. 2010 Sep;134(3):466-70. doi: 10.1309/AJCPHLQHJ0S3DFJK.
10
A Hybrid Speech Enhancement Algorithm for Voice Assistance Application.一种用于语音助手应用的混合语音增强算法。
Sensors (Basel). 2021 Oct 23;21(21):7025. doi: 10.3390/s21217025.

引用本文的文献

1
Classification of cervical biopsy free-text diagnoses through linear-classifier based natural language processing.通过基于线性分类器的自然语言处理对宫颈活检自由文本诊断进行分类。
J Pathol Inform. 2022 Jul 1;13:100123. doi: 10.1016/j.jpi.2022.100123. eCollection 2022.

本文引用的文献

1
Pathology report data extraction from relational database using R, with extraction from reports on melanoma of skin as an example.使用R从关系数据库中提取病理报告数据,并以皮肤黑色素瘤报告的提取为例。
J Pathol Inform. 2016 Oct 21;7:44. doi: 10.4103/2153-3539.192822. eCollection 2016.
2
It's Our Turn: Implications for Pathology From the Institute of Medicine's Report on Diagnostic Error.轮到我们了:医学研究所关于诊断错误报告对病理学的影响
Arch Pathol Lab Med. 2016 Jun;140(6):505-7. doi: 10.5858/arpa.2015-0499-ED. Epub 2016 Jan 12.
3
Artificial Intelligence for Pathologists Is Not Near--It Is Here: Description of a Prototype That Can Transform How We Practice Pathology Tomorrow.
面向病理学家的人工智能并非即将到来——它已在这里:描述一个能够改变我们未来病理学实践方式的原型。
Arch Pathol Lab Med. 2015 Jul;139(7):929-35. doi: 10.5858/arpa.2014-0478-OA.
4
Interpretive Diagnostic Error Reduction in Surgical Pathology and Cytology: Guideline From the College of American Pathologists Pathology and Laboratory Quality Center and the Association of Directors of Anatomic and Surgical Pathology.解读外科病理学和细胞学中的诊断错误:美国病理学家学院病理和实验室质量中心与解剖和外科病理学主任协会的指南。
Arch Pathol Lab Med. 2016 Jan;140(1):29-40. doi: 10.5858/arpa.2014-0511-SA. Epub 2015 May 12.
5
Uniform Labeling of Blocks and Slides in Surgical Pathology: Guideline From the College of American Pathologists Pathology and Laboratory Quality Center and the National Society for Histotechnology.外科病理学中组织块和切片的统一标记:美国病理学家学会病理学和实验室质量中心以及国家组织技术学会的指南。
Arch Pathol Lab Med. 2015 Dec;139(12):1515-24. doi: 10.5858/arpa.2014-0340-SA. Epub 2015 Apr 21.
6
Specimen labeling errors in surgical pathology: an 18-month experience.手术病理学标本标签错误:18 个月的经验。
Am J Clin Pathol. 2010 Sep;134(3):466-70. doi: 10.1309/AJCPHLQHJ0S3DFJK.
7
Patient safety and error reduction in surgical pathology.手术病理学中的患者安全与差错减少
Arch Pathol Lab Med. 2008 Feb;132(2):181-5. doi: 10.5858/2008-132-181-PSAERI.
8
Measuring errors in surgical pathology in real-life practice: defining what does and does not matter.在实际临床实践中测量外科病理学中的误差:明确哪些重要、哪些不重要。
Am J Clin Pathol. 2007 Jan;127(1):144-52. doi: 10.1309/5KF89P63F4F6EUHB.
9
Error reduction in surgical pathology.手术病理学中的误差减少
Arch Pathol Lab Med. 2006 May;130(5):630-2. doi: 10.5858/2006-130-630-ERISP.
10
Defining error in anatomic pathology.
Arch Pathol Lab Med. 2006 May;130(5):604-6. doi: 10.5858/2006-130-604-DEIAP.