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生物膜中细菌淀粉样纤维的分子结构。

Molecular architecture of bacterial amyloids in biofilms.

机构信息

L'Institut de Chimie et Biologie des Membranes et des Nano-Objets (CBMN), Unité Mixte de Recherche (UMR) 5248, Centre National de la Recherche (CNRS), University of Bordeaux, Pessac, France.

Departamento de Microbiología, Universidad de Málaga, Málaga, Spain.

出版信息

FASEB J. 2019 Nov;33(11):12146-12163. doi: 10.1096/fj.201900831R. Epub 2019 Aug 5.

Abstract

The formation of biofilms provides structural and adaptive bacterial response to the environment. In species, the biofilm extracellular matrix is composed of exopolysaccharides, hydrophobins, and several functional amyloid proteins. We report, using multiscale approaches such as solid-state NMR (SSNMR), electron microscopy, X-ray diffraction, dynamic light scattering, attenuated total reflection Fourier transform infrared (FTIR), and immune-gold labeling, the molecular architecture of and pathogenic functional amyloids. SSNMR data reveal that the major amyloid component TasA in its fibrillar amyloid form contain β-sheet and α-helical secondary structure, suggesting a nontypical amyloid architecture in . Proteinase K digestion experiments indicate the amyloid moiety is ∼100 aa long, and subsequent SSNMR and FTIR signatures for and TasA filaments highlight a conserved amyloid fold, albeit with substantial differences in structural polymorphism and secondary structure composition. Structural analysis and coassembly data on the accessory protein TapA in and its counterpart camelysin in reveal a catalyzing effect between the functional amyloid proteins and a common structural architecture, suggesting a coassembly in the context of biofilm formation. Our findings highlight nontypical amyloid behavior of these bacterial functional amyloids, underlining structural variations between biofilms even in closely related bacterial species.-El Mammeri, N., Hierrezuelo, J., Tolchard, J., Cámara-Almirón, J., Caro-Astorga, J., Álvarez-Mena, A., Dutour, A., Berbon, M., Shenoy, J., Morvan, E., Grélard, A., Kauffmann, B., Lecomte, S., de Vicente, A., Habenstein, B., Romero, D., Loquet, A. Molecular architecture of bacterial amyloids in biofilms.

摘要

生物膜的形成为细菌提供了对环境的结构和适应性反应。在 物种中,生物膜的细胞外基质由胞外多糖、疏水性蛋白和几种功能淀粉样蛋白组成。我们使用固态 NMR(SSNMR)、电子显微镜、X 射线衍射、动态光散射、衰减全反射傅里叶变换红外(FTIR)和免疫金标记等多尺度方法,报告了 和致病性 功能淀粉样蛋白的分子结构。SSNMR 数据显示,其纤维状淀粉样形式的主要淀粉样蛋白 TasA 含有β-折叠和α-螺旋二级结构,表明 中的非典型淀粉样结构。蛋白酶 K 消化实验表明,淀粉样部分约 100 个氨基酸长,随后对 和 TasA 纤维的 SSNMR 和 FTIR 特征突出了保守的淀粉样折叠,尽管在结构多态性和二级结构组成方面存在很大差异。在 中的辅助蛋白 TapA 及其在 中的对应物 camelysin 的结构分析和共组装数据表明,功能淀粉样蛋白之间存在催化作用和共同的结构架构,这表明在生物膜形成的背景下存在共组装。我们的研究结果强调了这些细菌功能淀粉样蛋白的非典型淀粉样行为,突出了即使在密切相关的细菌物种中生物膜之间的结构差异。-El Mammeri,N.,Hierrezuelo,J.,Tolchard,J.,Cámara-Almirón,J.,Caro-Astorga,J.,Álvarez-Mena,A.,Dutour,A.,Berbon,M.,Shenoy,J.,Morvan,E.,Grélard,A.,Kauffmann,B.,Lecomte,S.,de Vicente,A.,Habenstein,B.,Romero,D.,Loquet,A. 细菌淀粉样蛋白在 生物膜中的分子结构。

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