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小麦在黄斑病(小麦黄斑病菌)发病期间的转录组变化。

Transcriptomic changes in wheat during tan spot (Pyrenophora tritici-repentis) disease.

作者信息

Andersen Ethan J, Ali Shaukat, Nepal Madhav P

机构信息

Department of Biology and Microbiology, South Dakota State University, Brookings, SD, 57007, USA.

Department of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD, 57007, USA.

出版信息

BMC Res Notes. 2019 Aug 1;12(1):471. doi: 10.1186/s13104-019-4517-4.

Abstract

OBJECTIVES

Tan spot is a yield-reducing disease that affects wheat and is caused by the fungus Pyrenophora tritici-repentis (Ptr). Eight races of Ptr have been identified based upon production of the effectors Ptr ToxA, Ptr ToxB, and Ptr ToxC. Wheat cultivars have also been characterized by their resistance and susceptibility to races of Ptr and sensitivity to the effectors. The objective of this research was to assess differences in gene expression between Ptr resistant and susceptible wheat cultivars when either inoculated with Ptr race 2 spores or directly infiltrated with Ptr ToxA.

DATA DESCRIPTION

A greenhouse experiment was used to assess wheat-Ptr interaction. Wheat seedlings were grown for two weeks prior to the experiment under greenhouse conditions. Four treatments were used: (1) spray-inoculation with a suspension of Ptr spores (3000 spores/mL) (2) spray inoculation with water as a control (3) needleless syringe injection with Ptr ToxA, and (4) needleless syringe injection with water as a control. Plants were transferred to a humidity chamber and leaf sample were taken at 0, 8, and 16 h. After RNA extraction and sequencing, 48 RNA datasets are reported. This data will be useful in understanding how resistant wheat responds to Ptr compared to susceptible wheat.

摘要

目标

黄斑病是一种影响小麦产量的病害,由真菌小麦根腐离蠕孢(Ptr)引起。根据效应子Ptr ToxA、Ptr ToxB和Ptr ToxC的产生,已鉴定出8个Ptr小种。小麦品种也根据它们对Ptr小种的抗性和敏感性以及对效应子的敏感性进行了特征描述。本研究的目的是评估接种Ptr小种2孢子或直接注射Ptr ToxA后,抗Ptr和感Ptr小麦品种之间的基因表达差异。

数据描述

采用温室试验评估小麦与Ptr的相互作用。在试验前,小麦幼苗在温室条件下生长两周。使用了四种处理:(1)用Ptr孢子悬浮液(3000个孢子/毫升)喷雾接种;(2)用水喷雾接种作为对照;(3)用Ptr ToxA进行无针注射器注射;(4)用水进行无针注射器注射作为对照。将植株转移到湿度箱中,并在0、8和16小时采集叶片样本。经过RNA提取和测序,报告了48个RNA数据集。这些数据将有助于理解抗性小麦与感病小麦相比对Ptr的反应。

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