感染模式生物黑腹果蝇的微孢子虫物种拉蒂斯邦管形微孢子虫的基因组序列草图
Draft Genome Sequence of Tubulinosema ratisbonensis, a Microsporidian Species Infecting the Model Organism Drosophila melanogaster.
作者信息
Polonais Valérie, Niehus Sebastian, Wawrzyniak Ivan, Franchet Adrien, Gaspin Christine, Belkorchia Abdel, Reichstadt Matthieu, Belser Caroline, Labadie Karine, Couloux Arnaud, Delbac Frédéric, Peyretaillade Eric, Ferrandon Dominique
机构信息
Université Clermont Auvergne, CNRS, Laboratoire Microorganismes: Génome et Environnement, Clermont-Ferrand, France.
Université de Strasbourg CNRS, M3I UPR 9022, Strasbourg, France.
出版信息
Microbiol Resour Announc. 2019 Aug 1;8(31):e00077-19. doi: 10.1128/MRA.00077-19.
Abstract
We present the draft genome sequence of , a microsporidium species infecting A total of 3,013 protein-encoding genes and an array of transposable elements were identified. This work represents a necessary step to develop a novel model of host-parasite relationships using the highly tractable genetic model .
摘要
我们展示了一种感染[具体宿主]的微孢子虫物种的基因组序列草图。共鉴定出3013个蛋白质编码基因和一系列转座元件。这项工作是利用高度易处理的遗传模型开发宿主-寄生虫关系新模型的必要步骤。
相似文献
1
Draft Genome Sequence of Tubulinosema ratisbonensis, a Microsporidian Species Infecting the Model Organism Drosophila melanogaster.
Microbiol Resour Announc. 2019 Aug 1;8(31):e00077-19. doi: 10.1128/MRA.00077-19.
2
Fly culture collapse disorder: detection, prophylaxis and eradication of the microsporidian parasite Tubulinosema ratisbonensis infecting Drosophila melanogaster.
Fly (Austin). 2012 Jul-Sep;6(3):193-204. doi: 10.4161/fly.20896. Epub 2012 Jul 1.
3
Phosphatidic acid as a limiting host metabolite for the proliferation of the microsporidium Tubulinosema ratisbonensis in Drosophila flies.
Nat Microbiol. 2019 Apr;4(4):645-655. doi: 10.1038/s41564-018-0344-y. Epub 2019 Jan 28.
4
In vitro cultivation of an insect Microsporidian Tubulinosema ratisbonensis in mammalian cells.
J Eukaryot Microbiol. 2005 Jul-Aug;52(4):349-55. doi: 10.1111/j.1550-7408.2005.00043x.
5
Morphological and molecular investigations of Tubulinosema ratisbonensis gen. nov., sp. nov. (Microsporidia: Tubulinosematidae fam. nov.), a parasite infecting a laboratory colony of Drosophila melanogaster (Diptera: Drosophilidae).
J Eukaryot Microbiol. 2005 Mar-Apr;52(2):141-52. doi: 10.1111/j.1550-7408.2005.04-3324.x.
6
Phagocytosis Is the Sole Arm of Known Host Defenses That Provides Some Protection Against Microsporidia Infection.
Front Immunol. 2022 Apr 13;13:858360. doi: 10.3389/fimmu.2022.858360. eCollection 2022.
7
Ultrastructure and molecular characterization of a microsporidium, Tubulinosema hippodamiae, from the convergent lady beetle, Hippodamia convergens Guérin-Méneville.
J Invertebr Pathol. 2011 Feb;106(2):280-8. doi: 10.1016/j.jip.2010.11.002. Epub 2010 Nov 5.
8
An ultrastructural and molecular study of Tubulinosema kingi Kramer (Microsporidia: Tubulinosematidae) from Drosophila melanogaster (Diptera: Drosophilidae) and its parasitoid Asobara tabida (Hymenoptera: Braconidae).
J Invertebr Pathol. 2006 Mar;91(3):158-67. doi: 10.1016/j.jip.2005.11.007. Epub 2006 Jan 27.
9
Infection of Drosophila melanogaster by Tubulinosema kingi: stage-specific susceptibility and within-host proliferation.
J Invertebr Pathol. 2008 Oct;99(2):239-41. doi: 10.1016/j.jip.2008.02.014. Epub 2008 Mar 5.
10
Fitness effects and transmission routes of a microsporidian parasite infecting Drosophila and its parasitoids.
Parasitology. 2006 Apr;132(Pt 4):479-92. doi: 10.1017/S0031182005009339. Epub 2005 Dec 1.
引用本文的文献
1
MicroAnnot: A Dedicated Workflow for Accurate Microsporidian Genome Annotation.
Int J Mol Sci. 2024 Jan 10;25(2):880. doi: 10.3390/ijms25020880.
2
Identification and localization of polar tube proteins in the extruded polar tube of the microsporidian Anncaliia algerae.
Sci Rep. 2023 May 30;13(1):8773. doi: 10.1038/s41598-023-35511-y.
本文引用的文献
1
Phosphatidic acid as a limiting host metabolite for the proliferation of the microsporidium Tubulinosema ratisbonensis in Drosophila flies.
Nat Microbiol. 2019 Apr;4(4):645-655. doi: 10.1038/s41564-018-0344-y. Epub 2019 Jan 28.
2
Clarifying the Relationships between Microsporidia and Cryptomycota.
J Eukaryot Microbiol. 2018 Nov;65(6):773-782. doi: 10.1111/jeu.12519. Epub 2018 Apr 28.
3
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition.
Sci Data. 2017 Aug 1;4:170093. doi: 10.1038/sdata.2017.93.
4
Comparative genomics of microsporidian genomes reveals a minimal non-coding RNA set and new insights for transcription in minimal eukaryotic genomes.
DNA Res. 2017 Jun 1;24(3):251-260. doi: 10.1093/dnares/dsx002.
5
Enterocyte Purge and Rapid Recovery Is a Resilience Reaction of the Gut Epithelium to Pore-Forming Toxin Attack.
Cell Host Microbe. 2016 Dec 14;20(6):716-730. doi: 10.1016/j.chom.2016.10.010. Epub 2016 Nov 23.
6
The Ordospora colligata genome: Evolution of extreme reduction in microsporidia and host-to-parasite horizontal gene transfer.
mBio. 2015 Jan 13;6(1):e02400-14. doi: 10.1128/mBio.02400-14.
7
Microsporidian genomes harbor a diverse array of transposable elements that demonstrate an ancestry of horizontal exchange with metazoans.
Genome Biol Evol. 2014 Aug 28;6(9):2289-300. doi: 10.1093/gbe/evu178.
8
Structural and functional partitioning of bread wheat chromosome 3B.
Science. 2014 Jul 18;345(6194):1249721. doi: 10.1126/science.1249721.
9
Annotation of microsporidian genomes using transcriptional signals.
Nat Commun. 2012;3:1137. doi: 10.1038/ncomms2156.
10
Fly culture collapse disorder: detection, prophylaxis and eradication of the microsporidian parasite Tubulinosema ratisbonensis infecting Drosophila melanogaster.
Fly (Austin). 2012 Jul-Sep;6(3):193-204. doi: 10.4161/fly.20896. Epub 2012 Jul 1.
Zotero 插件