Institute of Chemistry, Faculty of Science, University of South Bohemia, Branisovska 1760, CZ-370 05 Ceske Budejovice, Czech Republic.
Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo namesti 2, CZ-166 10 Prague, Czech Republic.
Acta Crystallogr D Struct Biol. 2019 Aug 1;75(Pt 8):743-752. doi: 10.1107/S2059798319009586. Epub 2019 Jul 30.
The haloacid dehalogenase (HAD) superfamily is one of the largest known groups of enzymes and the majority of its members catalyze the hydrolysis of phosphoric acid monoesters into a phosphate ion and an alcohol. Despite the fact that sequence similarity between HAD phosphatases is generally very low, the members of the family possess some characteristic features, such as a Rossmann-like fold, HAD signature motifs or the requirement for Mg ion as an obligatory cofactor. This study focuses on a new hypothetical HAD phosphatase from Thermococcus thioreducens. The protein crystallized in space group P222, with unit-cell parameters a = 66.3, b = 117.0, c = 33.8 Å, and the crystals contained one molecule in the asymmetric unit. The protein structure was determined by X-ray crystallography and was refined to 1.75 Å resolution. The structure revealed a putative active site common to all HAD members. Computational docking into the crystal structure was used to propose substrates of the enzyme. The activity of this thermophilic enzyme towards several of the selected substrates was confirmed at temperatures of 37°C as well as 60°C.
卤酸脱卤酶 (HAD) 超家族是已知最大的酶类之一,其大多数成员催化磷酸单酯水解为磷酸离子和醇。尽管 HAD 磷酸酶之间的序列相似性通常非常低,但该家族的成员具有一些特征性特征,例如 Rossmann 样折叠、HAD 特征基序或需要 Mg 离子作为必需辅因子。本研究关注的是来自硫还原热球菌的一种新的假设 HAD 磷酸酶。该蛋白在空间群 P222 中结晶,具有单元细胞参数 a = 66.3、b = 117.0、c = 33.8 Å,并且晶体在不对称单元中包含一个分子。通过 X 射线晶体学确定了蛋白质结构,并将其精修至 1.75 Å 分辨率。该结构揭示了所有 HAD 成员共有的假定活性位点。计算对接到晶体结构中用于提出酶的底物。在 37°C 以及 60°C 的温度下,证实了这种嗜热酶对几种选定底物的活性。