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遗传与生物计量风险因素整合用于原发性闭角型青光眼检测。

Integration of Genetic and Biometric Risk Factors for Detection of Primary Angle Closure Glaucoma.

机构信息

Singapore Eye Research Institute, Singapore National Eye Centre, Singapore; Duke-NUS Medical School, Singapore.

Singapore Eye Research Institute, Singapore National Eye Centre, Singapore; Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Human Genetics, Genome Institute of Singapore, Singapore.

出版信息

Am J Ophthalmol. 2019 Dec;208:160-165. doi: 10.1016/j.ajo.2019.07.022. Epub 2019 Aug 1.

Abstract

PURPOSE

The purpose of this study was to investigate whether the addition of primary angle closure glaucoma (PACG)-associated genetic loci allows improved detection of PACG, compared to anterior segment parameters measured by imaging.

DESIGN

Case-control study.

METHODS

Genotype data of the 8 PACG single-nucleotide polymorphisms (SNPs) (rs11024102 at PLEKHA7, rs3753841 at COL11A1, rs1015213 located between PCMTD1 and ST18 on Chromosome 8q, rs3816415 at EPDR1, rs1258267 at CHAT, rs736893 at GLIS3, rs7494379 at FERMT2, and rs3739821 mapping in between DPM2 and FAM102A) were available. Customized software was used to measure anterior segment optical coherence tomography (ASOCT) parameters, namely, anterior chamber depth, width, and area (ACD, ACW, and ACA) and lens vault (LV). Statistical analysis for positive predictive values was modeled using the receiver operating characteristic curve (AUC). Statistical significance comparing predictive power of the different parameters was calculated using permutation.

RESULTS

A total of 388 PACG subjects and 751 controls with both ASOCT and genetic data were available for analysis. Anterior segment parameters including ACD, ACA, and LV had excellent predictive value (AUCs >0.94), except ACW (AUC=0.65), for identifying PACG. The inclusion of genetic risk alleles (either singly or as a composite genetic risk score for 8 genomewide association study SNPs) to ACD only provided a +0.50% improvement in reclassifying PACG cases and controls over and above the discriminatory value of ACD. This +0.50% improvement was not statistically significant (P > .05).

CONCLUSIONS

Although significant on their own, the incorporation of genetic data in the context of anterior segment imaging parameters like ACD provided only a marginal improvement of PACG detection.

摘要

目的

本研究旨在探讨原发性闭角型青光眼(PACG)相关遗传位点的加入是否能提高 PACG 的检出率,与通过成像测量前节参数相比。

设计

病例对照研究。

方法

本研究共纳入 8 个 PACG 单核苷酸多态性(SNP)(rs11024102 位于 PLEKHA7,rs3753841 位于 COL11A1,rs1015213 位于 8q 染色体 PCMTD1 和 ST18 之间,rs3816415 位于 EPDR1,rs1258267 位于 CHAT,rs736893 位于 GLIS3,rs7494379 位于 FERMT2,rs3739821 位于 DPM2 和 FAM102A 之间)的基因型数据。使用定制软件测量前节光学相干断层扫描(ASOCT)参数,即前房深度、宽度和面积(ACD、ACW 和 ACA)和晶状体拱顶(LV)。使用接收者操作特征曲线(AUC)对阳性预测值进行统计分析。使用置换法计算不同参数预测能力的统计学显著性。

结果

共纳入 388 例 PACG 患者和 751 例同时具有 ASOCT 和遗传数据的对照者,用于分析。前节参数包括 ACD、ACA 和 LV 具有极好的预测价值(AUC>0.94),除 ACW(AUC=0.65)外,均可识别 PACG。仅将遗传风险等位基因(单独或作为 8 个全基因组关联研究 SNP 的复合遗传风险评分)纳入 ACD,与 ACD 的区分值相比,仅能使 PACG 病例和对照者的再分类提高+0.50%。这种+0.50%的改善没有统计学意义(P>0.05)。

结论

尽管单独具有统计学意义,但在 ACD 等前节成像参数的背景下纳入遗传数据,对 PACG 的检测仅能提供微小的改善。

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