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蛋白质促进的离子传递机制在极化水/有机界面处的特性。

Characterization of Protein-Facilitated Ion-Transfer Mechanism at a Polarized Aqueous/Organic Interface.

机构信息

Department of Chemistry, College of Sciences , University of Sharjah , Sharjah 27272 , United Arab Emirates.

出版信息

J Phys Chem B. 2019 Aug 29;123(34):7436-7444. doi: 10.1021/acs.jpcb.9b04746. Epub 2019 Aug 19.

DOI:10.1021/acs.jpcb.9b04746
PMID:31379167
Abstract

Protein electrochemistry studies at a polarized interface between two immiscible electrolyte solutions (ITIES) indicate that the detection mechanism of a protein at the interface involves a combination of protein-anion complexation and interfacial adsorption processes. A detailed characterization of the protein-facilitated mechanism of ion transfer at the ITIES will allow the development of new label-free biomolecular detection tools. Molecular dynamics simulations were performed to describe the mechanism of transfer of the hydrophobic anion tetraphenylborate (TPB) from a 1,2-dichloroethane (organic) phase to an aqueous phase mediated by lysozyme as a model protein under the action of an external electric field. The anion migrated to the protein at the interface and formed multiple contacts. The side chains of positively charged Lys and Arg residues formed electrostatic interactions with the anion. Nonpolar residues like Trp, Met, and Val formed hydrophobic contacts with the anion as it moved along the protein surface. During this process, lysozyme adopted multiple, partially unfolded conformations at the interface, all involving various anion-protein complexes with small free-energy barriers between them. The general mechanism of protein-facilitated ion transfer at a polarized liquid-liquid interface thus likely involves the movement of a hydrophobic anion along the protein surface through a combination of electrostatic and hydrophobic interactions.

摘要

蛋白质在两种不混溶电解质溶液(ITIES)之间的极化界面上的电化学研究表明,蛋白质在界面处的检测机制涉及蛋白质-阴离子络合和界面吸附过程的结合。详细描述蛋白质在ITIES 中促进离子转移的机制将允许开发新的无标记生物分子检测工具。进行了分子动力学模拟,以描述溶菌酶作为模型蛋白在外部电场作用下,疏水性阴离子四苯硼(TPB)从 1,2-二氯乙烷(有机)相转移到水相的机制。阴离子迁移到界面处的蛋白质并形成多个接触。带正电荷的 Lys 和 Arg 残基的侧链与阴离子形成静电相互作用。当阴离子沿蛋白质表面移动时,像 Trp、Met 和 Val 这样的非极性残基与阴离子形成疏水接触。在此过程中,溶菌酶在界面上采用了多种部分展开的构象,所有这些构象都涉及到它们之间具有小自由能势垒的各种阴离子-蛋白质复合物。因此,在极化的液-液界面上,蛋白质促进离子转移的一般机制可能涉及疏水性阴离子通过静电和疏水相互作用沿着蛋白质表面的移动。

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