Department of System Chemotherapy and Molecular Sciences, Division of Bioinformatics and Chemical Genomics, Graduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, 606-8501, Japan.
Present address: Department of Pharmacy, National University of Singapore, 18 Science Drive 4, Singapore, 117543, Singapore.
Angew Chem Int Ed Engl. 2019 Sep 16;58(38):13486-13491. doi: 10.1002/anie.201905970. Epub 2019 Aug 7.
Organisms often produce secondary metabolites as a mixture of biosynthetically related congeners. However, why are metabolites with minor chemical variations produced simultaneously? 5-Alkyl-1,2,3,4-tetrahydroquinolines (5aTHQs) are small, lipophilic metabolites produced by Streptomyces nigrescens HEK616 when cultured with Tsukamurella pulmonis TP-B0596. A mixture of 5aTHQs forms aggregates that show enhanced membrane affinity and biological activity. The ability to form aggregates and membrane-binding activity is regulated by the length of the alkyl chains. Aggregates with long alkyl chains were too stable to fuse with lipid membranes. However, if inactive 5aTHQ congener was mixed with active congener, the mixture showed increased membrane affinity, enabling cellular entry and biological activity. Therefore, it is shown that sloppiness in a biosynthetic pathway, by which minor structural variations can be produced, is functionally rational, as the metabolites show synergistic action.
生物体会同时产生具有微小化学差异的代谢物,这些代谢物通常作为生物合成相关同系物的混合物存在。然而,为什么会产生具有微小化学差异的代谢物呢?当链霉菌属(Streptomyces nigrescens)HEK616 与分枝杆菌属(Tsukamurella pulmonis)TP-B0596 共培养时,会产生 5- 烷基-1,2,3,4-四氢喹啉(5aTHQ)等小分子亲脂性代谢物。5aTHQ 混合物可形成聚集体,显示出增强的膜亲和力和生物活性。形成聚集体和膜结合活性的能力受烷基链长度的调节。长烷基链的聚集体太稳定,无法与脂质膜融合。然而,如果将无活性的 5aTHQ 同系物与活性同系物混合,混合物显示出增强的膜亲和力,从而能够进入细胞并表现出生物活性。因此,生物合成途径中的这种“草率”(即可以产生微小结构变化)在功能上是合理的,因为代谢物表现出协同作用。