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基于网络的分析揭示了散发性非综合征性胸主动脉瘤患者外周血中的新型基因特征。

Network-based analysis reveals novel gene signatures in the peripheral blood of patients with sporadic nonsyndromic thoracic aortic aneurysm.

机构信息

Department of Cardiovascular Surgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China.

出版信息

J Cell Physiol. 2020 Mar;235(3):2478-2491. doi: 10.1002/jcp.29152. Epub 2019 Sep 6.

Abstract

Thoracic aortic aneurysm (TAA), a serious cardiovascular disease that causes morbidity and mortality worldwide. At present, few biomarkers can accurately diagnose the appearance of TAA before dissection or rupture. Our research has the intention to investigate the developing applicable biomarkers for TAA promising clinically diagnostic biomarkers or probable regulatory targets for TAA. In our research, we built correlation networks utilizing the expression profile of peripheral blood mononuclear cell obtained from a public microarray data set (GSE9106). Furthermore, we chose the turquoise module, which has the strongest significance with TAA and was further analyzed. Fourteen genes that overlapped with differentially expressed proteins in the medial aortic layer were obtained. Subsequently, we verified the results applying quantitative polymerase chain reaction (Q-PCR) to our clinical specimen. In general, the Q-PCR results coincide with the majority of the expression profile. Fascinatingly, a notable change occurred in CLU, DES, MYH10, and FBLN5. In summary, using weighted gene coexpression analysis, our study indicates that CLU, DES, MYH10, and FBLN5 were identified and validated to be related to TAA and might be candidate biomarkers or therapeutic targets for TAA.

摘要

胸主动脉瘤(TAA)是一种严重的心血管疾病,在全球范围内导致发病率和死亡率。目前,很少有生物标志物可以准确诊断 TAA 在夹层或破裂前的出现。我们的研究旨在探讨 TAA 的潜在临床诊断生物标志物或可能的调节靶点的开发应用生物标志物。在我们的研究中,我们利用从公共微阵列数据集(GSE9106)获得的外周血单核细胞表达谱构建了相关网络。此外,我们选择了与 TAA 相关性最强的绿松石模块,并进一步进行了分析。获得了与中层主动脉层中差异表达蛋白重叠的 14 个基因。随后,我们应用定量聚合酶链反应(Q-PCR)对临床标本进行了验证。总的来说,Q-PCR 结果与表达谱的大部分相符。有趣的是,CLU、DES、MYH10 和 FBLN5 发生了显著变化。总之,使用加权基因共表达分析,我们的研究表明,CLU、DES、MYH10 和 FBLN5 与 TAA 有关,可能是 TAA 的候选生物标志物或治疗靶点。

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