Am Nat. 2019 Oct;194(4):470-481. doi: 10.1086/704772. Epub 2019 Aug 26.
Nongenetic inheritance media-from methyl-accepting cytosines to culture-tend to mutate more frequently than DNA sequences. Whether this makes them inexhaustible suppliers for adaptive evolution will depend on the effect of nongenetic mutations (hereafter, epimutations) on fitness-related traits. Here we investigate how these effects might themselves evolve, specifically whether natural selection may set boundaries to the adaptive potential of nongenetic inheritance media because of their higher mutability. In our model, the genetic and epigenetic contributions to a nonneutral phenotype are controlled by an epistatic modifier locus, which evolves under the combined effects of drift and selection. We show that a pure genetic control evolves when the environment is stable-provided that the population is large-such that the phenotype becomes robust to frequent epimutations. When the environment fluctuates, however, selection on the modifier locus also fluctuates and can overall produce a large nongenetic contribution to the phenotype, especially when the epimutation rate matches the rate of environmental variation. We further show that selection on the modifier locus is generally insensitive to recombination, meaning it is mostly direct, that is, not relying on subsequent effects in future generations. These results suggest that unstable inheritance media might significantly contribute to fitness variation of traits subject to highly variable selective pressures but little to traits responding to scarcely variable aspects of the environment. More generally, our study demonstrates that the rate of mutation and the adaptive potential of any inheritance media should not be seen as independent properties.
非遗传继承介质——从甲基化胞嘧啶到培养物——往往比 DNA 序列更容易发生突变。它们是否能成为适应进化的取之不尽的供应者,将取决于非遗传突变(以下简称表观突变)对与适应相关的特征的影响。在这里,我们研究了这些影响可能如何演变,特别是自然选择是否会因为非遗传继承介质的更高突变率而对其适应潜力设定限制。在我们的模型中,非中性表型的遗传和表观遗传贡献由一个上位修饰基因座控制,该基因座在漂变和选择的综合作用下进化。我们表明,当环境稳定时(只要种群足够大),就会产生纯遗传控制,从而使表型对频繁的表观突变具有稳健性。然而,当环境波动时,修饰基因座上的选择也会波动,并且可以整体上为表型提供大量的非遗传贡献,特别是当表观突变率与环境变化率匹配时。我们进一步表明,修饰基因座上的选择对重组通常不敏感,这意味着它主要是直接的,即不依赖于后代的后续效应。这些结果表明,不稳定的遗传介质可能会对受高度可变选择压力影响的特征的适应性产生显著贡献,但对响应环境中变化较少方面的特征贡献较小。更一般地说,我们的研究表明,任何遗传介质的突变率和适应潜力都不应被视为独立的特性。