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工程染色体区域维持 1 片段与核输出信号结合。

Engineering chromosome region maintenance 1 fragments that bind to nuclear export signals.

机构信息

Department of Pathology, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, Sichuan University, and Collaborative Innovation Centre of Biotherapy, Chengdu, China.

Key Laboratory of Birth Defects and Related Diseases of Women and Children, Department of Paediatrics, Division of Neurology, West China Second University Hospital, Sichuan University, Chengdu, China.

出版信息

Protein Sci. 2020 Jun;29(6):1366-1372. doi: 10.1002/pro.3724. Epub 2019 Sep 14.

DOI:10.1002/pro.3724
PMID:31495993
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7255508/
Abstract

Chromosome region maintenance 1 (CRM1) exports nuclear export signal (NES) containing cargos from nucleus to cytoplasm and plays critical roles in cancer and viral infections. Biochemical and biophysical studies on this protein were often obstructed by its low purification yield and stability. With the help of PROSS server and NES protection strategy, we successfully designed three small fragments of CRM1, each made of four HEAT repeats and capable of binding to NESs in the absence of RanGTP. One of the fragments, C7, showed dramatically improved purification yield, thermostability, mechanostability, and resistance to protease digestion. We showed by isothermal titration that the protein kinase inhibitor NES binds to C7 at 1.18 μM affinity. Direct binding to C7 by several reported CRM1 inhibitors derived from plants were verified using pull-down assays. These fragments might be useful for the development of CRM1 inhibitors towards treatment of related diseases. The strategy applied here might help to tackle similar problems encountered in different fields.

摘要

染色质区域维持蛋白 1(CRM1)将含有核输出信号(NES)的货物从细胞核输出到细胞质,在癌症和病毒感染中发挥着关键作用。对这种蛋白质的生化和生物物理研究常常受到其低纯化产量和稳定性的阻碍。在 PROSS 服务器和 NES 保护策略的帮助下,我们成功设计了 CRM1 的三个小片段,每个片段由四个 HEAT 重复组成,在没有 RanGTP 的情况下能够结合 NES。其中一个片段 C7 显示出显著提高的纯化产量、热稳定性、机械稳定性和对蛋白酶消化的抵抗力。我们通过等温滴定量热法表明,蛋白激酶抑制剂 NES 以 1.18 μM 的亲和力与 C7 结合。使用下拉测定法验证了几种来自植物的报道的 CRM1 抑制剂与 C7 的直接结合。这些片段可能有助于开发针对相关疾病的 CRM1 抑制剂。这里应用的策略可能有助于解决不同领域遇到的类似问题。

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Engineering chromosome region maintenance 1 fragments that bind to nuclear export signals.工程染色体区域维持 1 片段与核输出信号结合。
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2
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本文引用的文献

1
Structural prerequisites for CRM1-dependent nuclear export signaling peptides: accessibility, adapting conformation, and the stability at the binding site.CRM1 依赖性核输出信号肽的结构前提条件:可及性、适应构象和结合位点的稳定性。
Sci Rep. 2019 Apr 29;9(1):6627. doi: 10.1038/s41598-019-43004-0.
2
Distinct RanBP1 nuclear export and cargo dissociation mechanisms between fungi and animals.真菌和动物之间 RanBP1 的核输出和货物分离机制明显不同。
Elife. 2019 Apr 25;8:e41331. doi: 10.7554/eLife.41331.
3
Traditional herbal medicine-derived sulforaphene promotes mitophagic cell death in lymphoma cells through CRM1-mediated p62/SQSTM1 accumulation and AMPK activation.传统草药来源的萝卜硫素通过CRM1介导的p62/SQSTM1积累和AMPK激活促进淋巴瘤细胞的线粒体自噬性细胞死亡。
Chem Biol Interact. 2018 Feb 1;281:11-23. doi: 10.1016/j.cbi.2017.12.017. Epub 2017 Dec 13.
4
CRM1 Inhibitors for Antiviral Therapy.用于抗病毒治疗的CRM1抑制剂。
Front Microbiol. 2017 Jun 28;8:1171. doi: 10.3389/fmicb.2017.01171. eCollection 2017.
5
Nuclear export receptor CRM1 recognizes diverse conformations in nuclear export signals.核输出受体CRM1识别核输出信号中的多种构象。
Elife. 2017 Mar 10;6:e23961. doi: 10.7554/eLife.23961.
6
Caffeic acid phenethyl ester (CAPE) revisited: Covalent modulation of XPO1/CRM1 activities and implication for its mechanism of action.咖啡酸苯乙酯(CAPE)再探讨:XPO1/CRM1活性的共价调节及其作用机制
Chem Biol Drug Des. 2017 May;89(5):655-662. doi: 10.1111/cbdd.12905. Epub 2017 Mar 8.
7
Automated Structure- and Sequence-Based Design of Proteins for High Bacterial Expression and Stability.基于结构和序列的蛋白质自动化设计,以实现高效细菌表达和稳定性
Mol Cell. 2016 Jul 21;63(2):337-346. doi: 10.1016/j.molcel.2016.06.012. Epub 2016 Jul 14.
8
The RanBP2/RanGAP1*SUMO1/Ubc9 SUMO E3 ligase is a disassembly machine for Crm1-dependent nuclear export complexes.RanBP2/RanGAP1*SUMO1/Ubc9 SUMO E3 连接酶是依赖 Crm1 的核输出复合物的解组装机器。
Nat Commun. 2016 May 10;7:11482. doi: 10.1038/ncomms11482.
9
Targeting nuclear transporters in cancer: Diagnostic, prognostic and therapeutic potential.靶向癌症中的核转运蛋白:诊断、预后及治疗潜力
IUBMB Life. 2016 Apr;68(4):268-80. doi: 10.1002/iub.1484. Epub 2016 Mar 11.
10
A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning.关于CRM1介导的核输出和核质分配的深度蛋白质组学视角。
Elife. 2015 Dec 17;4:e11466. doi: 10.7554/eLife.11466.