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用于免疫表型分析的荧光细胞条形码技术

Fluorescent Cell Barcoding for Immunophenotyping.

作者信息

Giudice Valentina, Fantoni Giovanna, Biancotto Angélique

机构信息

Department of Medicine, Surgery, and Dentistry, Scuola Medica Salernitana, University of Salerno, Baronissi, Italy.

Center for Human Immunology, NIAID, NIH, Bethesda, MD, USA.

出版信息

Methods Mol Biol. 2019;2032:53-68. doi: 10.1007/978-1-4939-9650-6_3.

DOI:10.1007/978-1-4939-9650-6_3
PMID:31522412
Abstract

Immunophenotyping using flow cytometry highly benefits from multiplexing samples for generation of more robust data, because of reduction of antibody consumption, batch effect and technical variations. One way to multiplex is via fluorescent cell barcoding (FCB) prior to staining procedure.FCB is a high-throughput multiplexed assay using various concentrations of different fluorescent dyes. Individual samples are uniquely labeled, then mixed together, stained and analyzed as a single sample, decreasing technical variations and increasing throughput and speed of acquisition. In addition, FCB simplifies implementation of normalization using a bridge control sample.In this chapter, we illustrate the protocol for FCB and recommendations for choosing barcoding dyes and concentrations among other technical considerations.

摘要

使用流式细胞术进行免疫表型分析通过对样本进行多重检测以生成更可靠的数据而受益匪浅,这是因为减少了抗体消耗、批次效应和技术差异。一种多重检测的方法是在染色程序之前通过荧光细胞条形码(FCB)实现。FCB是一种使用不同浓度的各种荧光染料的高通量多重检测方法。单个样本被独特标记,然后混合在一起,作为单个样本进行染色和分析,减少了技术差异,提高了通量和采集速度。此外,FCB简化了使用桥接对照样本进行标准化的实施过程。在本章中,我们阐述了FCB的方案以及在其他技术考虑因素中选择条形码染料和浓度的建议。

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引用本文的文献

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Data processing workflow for large-scale immune monitoring studies by mass cytometry.基于质谱流式细胞术的大规模免疫监测研究的数据处理工作流程。
Comput Struct Biotechnol J. 2021 May 21;19:3160-3175. doi: 10.1016/j.csbj.2021.05.032. eCollection 2021.
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Key steps and methods in the experimental design and data analysis of highly multi-parametric flow and mass cytometry.
高多参数流式细胞术和质谱流式细胞术实验设计与数据分析中的关键步骤和方法。
Comput Struct Biotechnol J. 2020 Mar 31;18:874-886. doi: 10.1016/j.csbj.2020.03.024. eCollection 2020.