College of Fisheries, Henan Normal University, Xinxiang, 453007, PR China.
State Key Laboratory of Biocontrol and Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University, Guangzhou, 510275, PR China.
Int J Syst Evol Microbiol. 2019 Dec;69(12):3792-3799. doi: 10.1099/ijsem.0.003682.
A novel actinobacterium, designated strain CFH 30434, was isolated from a soil sample collected from a karst cave in Luoyang, Henan Province, PR China. The taxonomic position of the strain was investigated by using a polyphasic approach. Cells of the strain were aerobic, Gram-stain-positive, non-motile and coccoid or short rods. The strain was found to be oxidase-positive and weakly catalase-positive. Strain CFH 30434 grew optimally at 28 °C, pH 7.0-9.0 and in the presence of up to 0-1.5 % NaCl (w/v). The whole-cell sugars were glucose, mannose and rhamnose. The major isoprenoid quinone was MK-9(H) and the major fatty acids (>10 % of the total fatty acids compositions) were anteiso-C, iso-C and iso-C. The polar lipids detected were diphosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannoside, an unidentified phosphoglycolipid, an unidentified phospholipid and an unidentified glycolipid. The genomic DNA G+C content was determined to be 72.3 mol%. The results of phylogenetic analysis of 16S rRNA gene sequences indicated that CFH 30434 clustered within the family , and closely with the type strains of DSM 12657, DSM 17134 and CCTCC AA 208046 (97.3 %, 96.2 and 95.9 % sequence similarities, respectively). Phylogenetic analysis showed that strain CFH 30434 formed a separate evolutionary branch, and was parallel to other related genera of . Its phylogenetic distinctiveness and distinguishing phenotypic characteristics supported that strain CFH 30434 represents a novel genus of the family , for which the name gen. nov., sp. nov. is proposed. The type strain is CFH 30434 (=CGMCC 1.13856=KCTC 49093).
一株新型放线菌,命名为 CFH 30434 菌株,从中国河南省洛阳市一处喀斯特洞穴的土壤样本中分离得到。通过多相分类学方法研究了该菌株的分类地位。该菌株为需氧、革兰氏阳性、非运动、球形或短杆状。该菌株氧化酶阳性,过氧化氢酶弱阳性。CFH 30434 菌株在 28°C、pH7.0-9.0 及 0-1.5%NaCl(w/v)的条件下生长最佳。其全细胞糖为葡萄糖、甘露糖和鼠李糖。主要的异戊烯醌为 MK-9(H),主要脂肪酸(占总脂肪酸组成的>10%)为 anteiso-C、iso-C 和 iso-C。检测到的极性脂为双磷脂酰甘油、磷脂酰肌醇、磷脂酰肌醇甘露糖苷、一种未鉴定的磷酸甘油酯、一种未鉴定的磷脂和一种未鉴定的糖脂。基因组 DNA G+C 含量为 72.3mol%。16S rRNA 基因序列的系统发育分析结果表明,CFH 30434 聚类于放线菌科,与 DSM 12657、DSM 17134 和 CCTCC AA 208046 (97.3%、96.2%和 95.9%序列相似性)的模式菌株关系最为密切。系统发育分析表明,CFH 30434 菌株形成一个独立的进化分支,与放线菌科的其他相关属平行。其独特的系统发育和明显的表型特征支持 CFH 30434 菌株代表放线菌科的一个新属,现提议建立一个新属,命名为 。模式菌株为 CFH 30434 菌株(=CGMCC 1.13856=KCTC 49093)。