Capelli Riccardo, Peri Claudio, Villa Riccardo, Nithichanon Arnone, Conchillo-Solé Oscar, Yero Daniel, Gagni Paola, Chiari Marcella, Lertmemongkolchai Ganjana, Cretich Marina, Daura Xavier, Bolognesi Martino, Colombo Giorgio, Gourlay Louise J
Istituto di Chimica del Riconoscimento Molecolare, Consiglio Nazionale delle Ricerche, Via Mario Bianco 9, 20131 Milano, Italy.
Center for Complexity and Biosystems and Dipartimento di Fisica, Università degli Studi di Milano and INFN, 20133 Milano, Italy.
Antibodies (Basel). 2018 Jul 19;7(3):26. doi: 10.3390/antib7030026.
Due to significant advances in computational biology, protein prediction, together with antigen and epitope design, have rapidly moved from conventional methods, based on experimental approaches, to in silico-based bioinformatics methods. In this context, we report a reverse vaccinology study that identified a panel of 104 candidate antigens from the Gram-negative bacterial pathogen , which is responsible for the disease melioidosis. can cause fatal sepsis in endemic populations in the tropical regions of the world and treatment with antibiotics is mostly ineffective. With the aim of identifying potential vaccine candidates, we report the experimental validation of predicted antigen and type I fimbrial subunit, BPSL1626, which we show is able to recognize and bind human antibodies from the sera of infected patients and to stimulate T-lymphocytes in vitro. The prerequisite for a melioidosis vaccine, in fact, is that both antibody- and cell-mediated immune responses must be triggered. In order to reveal potential antigenic regions of the protein that may aid immunogen re-design, we also report the crystal structure of BPSL1626 at 1.9 Å resolution on which structure-based epitope predictions were based. Overall, our data suggest that BPSL1626 and three epitope regions here-identified can represent viable candidates as potential antigenic molecules.
由于计算生物学的重大进展,蛋白质预测以及抗原和表位设计已迅速从基于实验方法的传统方法转向基于计算机的生物信息学方法。在此背景下,我们报告了一项反向疫苗学研究,该研究从革兰氏阴性细菌病原体中鉴定出一组104种候选抗原,该病原体是类鼻疽病的病因。类鼻疽杆菌可在世界热带地区的流行人群中引起致命的败血症,使用抗生素治疗大多无效。为了确定潜在的疫苗候选物,我们报告了对预测抗原和I型菌毛亚基BPSL1626的实验验证,我们发现它能够识别并结合来自类鼻疽杆菌感染患者血清中的人类抗体,并在体外刺激T淋巴细胞。事实上,类鼻疽病疫苗的前提条件是必须触发抗体介导和细胞介导的免疫反应。为了揭示可能有助于重新设计免疫原的蛋白质潜在抗原区域,我们还报告了分辨率为1.9 Å的BPSL1626晶体结构,基于该结构进行了表位预测。总体而言,我们的数据表明,BPSL1626和此处鉴定的三个表位区域可作为潜在的抗原分子成为可行的候选物。