School of Nutrition Sciences, Faculty of Health Sciences, University of Ottawa, Ottawa, Ontario, Canada.
Department of Medical Biochemistry, Faculty of Basic Medical Sciences, College of Medical Sciences, Alex Ekwueme Federal University, Ndufu-Alike, Abakaliki, Nigeria.
J Food Biochem. 2019 Dec;43(12):e13071. doi: 10.1111/jfbc.13071. Epub 2019 Oct 1.
In silico and in vitro parameters were used to assess the potential of pigeon pea (Cajanus cajan) nutrient reservoir proteins as sources of dipeptidyl peptidase (DPP)-4 inhibitors. In silico, 40 pigeon pea proteins evaluated had 46% of amino acids associated with DPP-4 inhibition. After virtual hydrolysis, pepsin had the highest frequency of release and bioactivity of released DPP-4 inhibiting peptides, compared to papain and thermolysin. In vitro, thermolysin released the most active DPP-4 inhibitors. The protein hydrolysates contained similar amino acids but different particle sizes. Thus, the bioactivity patterns are attributable to the different nature and behavior of proteins/peptides under actual and virtual conditions. Using eight physicochemical variables, a random forest model with moderate prediction accuracy was developed for predicting DPP-4 inhibitory activity of papain hydrolysates. The findings demonstrate that proteins from pigeon pea are precursors of DPP-4 inhibitors, with potential use in formulating functional food for managing type 2 diabetes. PRACTICAL APPLICATIONS: The emerging use of in silico simulations to predict bioactivity of peptides can provide a framework to direct further wet lab assessments. This pattern can enhance focusing on factors relevant to the bioactive properties of interest. However, there is still limited evidence to confirm the reliability and accuracy of this tool. This study therefore provides insight into the practical use of in silico simulations to predict bioactivity of food peptides by assessing the factors relevant to the enzymatic release of dipeptidyl peptidase-4 inhibitors from pigeon pea seed storage proteins and validating the findings with wet lab assessment. This work also provides important information that can enhance the utilization of pigeon pea, which is an orphan crop, in developing functional food products for managing type 2 diabetes mellitus in developing countries.
采用体内和体外参数评估了兵豆(Cajanus cajan)营养储备蛋白作为二肽基肽酶-4(DPP-4)抑制剂来源的潜力。在体内,评估的 40 种兵豆蛋白中有 46%的氨基酸与 DPP-4 抑制作用有关。与木瓜蛋白酶和嗜热菌蛋白酶相比,胃蛋白酶水解后释放的 DPP-4 抑制肽具有最高的释放频率和生物活性。在体外,嗜热菌蛋白酶释放的最具活性的 DPP-4 抑制剂。蛋白质水解物含有相似的氨基酸,但颗粒大小不同。因此,生物活性模式归因于实际和虚拟条件下蛋白质/肽的不同性质和行为。使用八个物理化学变量,开发了一个具有中等预测准确性的随机森林模型,用于预测木瓜蛋白酶水解物的 DPP-4 抑制活性。研究结果表明,兵豆蛋白是 DPP-4 抑制剂的前体,可用于开发用于治疗 2 型糖尿病的功能性食品。实际应用:新兴的体内模拟技术用于预测肽的生物活性,可以为进一步的湿实验室评估提供框架。这种模式可以增强对与感兴趣的生物活性特性相关因素的关注。然而,仍然缺乏证据来证实该工具的可靠性和准确性。因此,本研究通过评估与从兵豆种子贮藏蛋白中酶解释放二肽基肽酶-4 抑制剂相关的因素,并通过湿实验室评估验证研究结果,为使用体内模拟技术预测食品肽的生物活性提供了实用见解。这项工作还提供了重要信息,可以增强对孤儿作物兵豆的利用,开发用于管理发展中国家 2 型糖尿病的功能性食品产品。