Veterinary Public Health Institute, Vetsuisse Faculty, University of Bern, Liebefeld, Switzerland.
Veterinary Public Health Institute, Vetsuisse Faculty, University of Bern, Liebefeld, Switzerland.
Prev Vet Med. 2019 Nov 15;172:104778. doi: 10.1016/j.prevetmed.2019.104778. Epub 2019 Sep 21.
Multivariate Syndromic Surveillance (SyS) systems that simultaneously assess and combine information from different data sources are especially useful for strengthening surveillance systems for early detection of infectious disease epidemics. Despite the strong motivation for implementing multivariate SyS and there being numerous methods reported, the number of operational multivariate SyS systems in veterinary medicine is still very small. One possible reason is that assessing the performance of such surveillance systems remains challenging because field epidemic data are often unavailable. The objective of this study is to demonstrate a practical multivariate event detection method (directionally sensitive multivariate control charts) that can be easily applied in livestock disease SyS, using syndrome time series data from the Swiss cattle population as an example. We present a standardized method for simulating multivariate epidemics of different diseases using four diseases as examples: Bovine Virus Diarrhea (BVD), Infectious Bovine Rhinotracheitis (IBR), Bluetongue virus (BTV) and Schmallenberg virus (SV). Two directional multivariate control chart algorithms, Multivariate Exponentially Weighted Moving Average (MEWMA) and Multivariate Cumulative Sum (MCUSUM) were compared. The two algorithms were evaluated using 12 syndrome time series extracted from two Swiss national databases. The two algorithms were able to detect all simulated epidemics around 4.5 months after the start of the epidemic, with a specificity of 95%. However, the results varied depending on the algorithm and the disease. The MEWMA algorithm always detected epidemics earlier than the MCUSUM, and epidemics of IBR and SV were detected earlier than epidemics of BVD and BTV. Our results show that the two directional multivariate control charts are promising methods for combining information from multiple time series for early detection of subtle changes in time series from a population without producing an unreasonable amount of false alarms. The approach that we used for simulating multivariate epidemics is relatively easy to implement and could be used in other situations where real epidemic data are unavailable. We believe that our study results can support the implementation and assessment of multivariate SyS systems in animal health.
多元综合症状监测 (SyS) 系统可同时评估和综合来自不同数据源的信息,对于加强传染病疫情早期发现的监测系统特别有用。尽管实施多元 SyS 的动机很强,并且已经有许多方法被报道,但兽医领域的多元综合症状监测系统的数量仍然非常少。一个可能的原因是,由于现场疫情数据通常不可用,评估此类监测系统的性能仍然具有挑战性。本研究的目的是展示一种实用的多元事件检测方法(方向敏感的多元控制图),该方法可以很容易地应用于牲畜疾病监测系统,以瑞士牛群的综合症状时间序列数据为例。我们提出了一种使用四种疾病(牛病毒性腹泻、传染性牛鼻气管炎、蓝舌病病毒和沙米利昂贝病毒)模拟不同疾病的多元流行的标准化方法。比较了两种方向敏感的多元控制图算法,多元指数加权移动平均 (MEWMA) 和多元累积和 (MCUSUM)。使用从两个瑞士国家数据库中提取的 12 个综合症状时间序列对这两种算法进行了评估。这两种算法能够在疫情开始后约 4.5 个月检测到所有模拟的疫情,特异性为 95%。然而,结果因算法和疾病而异。MEWMA 算法总是比 MCUSUM 更早地检测到疫情,而 IBR 和 SV 的疫情比 BVD 和 BTV 的疫情更早地检测到。我们的研究结果表明,两种方向敏感的多元控制图是一种很有前途的方法,可以将多个时间序列的信息结合起来,用于在不产生大量误报的情况下,对无疫情人群中时间序列的细微变化进行早期检测。我们用于模拟多元流行的方法相对容易实施,可用于其他没有真实疫情数据的情况下。我们相信,我们的研究结果可以支持动物健康领域多元 SyS 系统的实施和评估。