• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从新加坡室内空气样本中分离出的藤黄微球菌菌株SGAir0127的全基因组序列

Complete Genome Sequence of Micrococcus luteus Strain SGAir0127, Isolated from Indoor Air Samples from Singapore.

作者信息

Kutmutia Shruti Ketan, Drautz-Moses Daniela I, Uchida Akira, Purbojati Rikky W, Wong Anthony, Kushwaha Kavita K, Putra Alexander, Premkrishnan Balakrishnan N V, Heinle Cassie E, Vettath Vineeth Kodengil, Junqueira Ana Carolina M, Schuster Stephan C

机构信息

Singapore Centre for Environmental Life Sciences Engineering, Nanyang Technological University, Singapore.

Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.

出版信息

Microbiol Resour Announc. 2019 Oct 10;8(41):e00646-19. doi: 10.1128/MRA.00646-19.

DOI:10.1128/MRA.00646-19
PMID:31601656
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6787313/
Abstract

strain SGAir0127 was isolated from indoor air samples collected in Singapore. The assembly, based on single-molecule real-time sequencing reads, resulted in two contigs, one chromosomal contig with a length of 2.57 Mbp and one nonchromosomal contig of 8.68 kbp. The genome has a total of 2,564 genes.

摘要

菌株SGAir0127是从新加坡采集的室内空气样本中分离出来的。基于单分子实时测序读数进行组装,得到了两个重叠群,一个长度为2.57 Mbp的染色体重叠群和一个8.68 kbp的非染色体重叠群。该基因组共有2564个基因。

相似文献

1
Complete Genome Sequence of Micrococcus luteus Strain SGAir0127, Isolated from Indoor Air Samples from Singapore.从新加坡室内空气样本中分离出的藤黄微球菌菌株SGAir0127的全基因组序列
Microbiol Resour Announc. 2019 Oct 10;8(41):e00646-19. doi: 10.1128/MRA.00646-19.
2
Complete Genome Sequence of Brevundimonas sp. Strain SGAir0440, Isolated from Indoor Air in Singapore.从新加坡室内空气中分离出的短波单胞菌属菌株SGAir0440的全基因组序列
Microbiol Resour Announc. 2019 Aug 1;8(31):e00594-19. doi: 10.1128/MRA.00594-19.
3
Whole-Genome Sequence of Bacillus megaterium Strain SGAir0080, Isolated from an Indoor Air Sample.从室内空气样本中分离出的巨大芽孢杆菌菌株SGAir0080的全基因组序列。
Microbiol Resour Announc. 2019 Dec 12;8(50):e01249-19. doi: 10.1128/MRA.01249-19.
4
Complete Genome Sequence of Micrococcus luteus Strain CW.Ay, Isolated from Indoor Air in a Hong Kong School.从香港一所学校室内空气中分离出的藤黄微球菌菌株CW.Ay的全基因组序列
Microbiol Resour Announc. 2022 Feb 17;11(2):e0119421. doi: 10.1128/mra.01194-21.
5
Complete Genome Sequence of Penicillium oxalicum Strain SGAir0226 Isolated from Outdoor Tropical Air in Singapore.一株分离自新加坡户外热带空气的草酸青霉 SGAir0226 的全基因组序列。
Mycopathologia. 2020 Jun;185(3):591-594. doi: 10.1007/s11046-019-00422-y. Epub 2020 Apr 8.
6
Complete Genome Sequence of sp. Strain SGAir0095, Isolated from Tropical Air Samples Collected in Singapore.从新加坡采集的热带空气样本中分离出的sp.菌株SGAir0095的全基因组序列
Microbiol Resour Announc. 2019 Sep 19;8(38):e00604-19. doi: 10.1128/MRA.00604-19.
7
Complete Genome Sequence of Citricoccus sp. Strain SGAir0253, Isolated from Indoor Air in Singapore.从新加坡室内空气中分离出的柠檬酸球菌属菌株SGAir0253的全基因组序列
Microbiol Resour Announc. 2019 Sep 12;8(37):e00606-19. doi: 10.1128/MRA.00606-19.
8
Complete Genome Sequence of Streptomyces sp. Strain SGAir0924, an Actinobacterium Isolated from Outdoor Air in Singapore.链霉菌属菌株SGAir0924的全基因组序列,该放线菌从新加坡室外空气中分离得到。
Microbiol Resour Announc. 2019 Aug 29;8(35):e00899-19. doi: 10.1128/MRA.00899-19.
9
Complete Genome Sequence of sp. Strain SGAir0570, Isolated from Tropical Air Collected in Singapore.从新加坡采集的热带空气中分离出的sp.菌株SGAir0570的全基因组序列
Microbiol Resour Announc. 2019 Aug 22;8(34):e00613-19. doi: 10.1128/MRA.00613-19.
10
Emended descriptions of the genus Micrococcus, Micrococcus luteus (Cohn 1872) and Micrococcus lylae (Kloos et al. 1974).微球菌属、藤黄微球菌(科恩,1872年)和里拉微球菌(克洛斯等人,1974年)的修订描述。
Int J Syst Evol Microbiol. 2002 Mar;52(Pt 2):629-37. doi: 10.1099/00207713-52-2-629.

引用本文的文献

1
Complete Genome Sequence of Micrococcus luteus Strain CW.Ay, Isolated from Indoor Air in a Hong Kong School.从香港一所学校室内空气中分离出的藤黄微球菌菌株CW.Ay的全基因组序列
Microbiol Resour Announc. 2022 Feb 17;11(2):e0119421. doi: 10.1128/mra.01194-21.
2
Whole-Genome Sequencing of Micrococcus luteus MT1691313, Isolated from the Mariana Trench.从马里亚纳海沟分离出的藤黄微球菌MT1691313的全基因组测序
Microbiol Resour Announc. 2021 Jun 10;10(23):e0036921. doi: 10.1128/MRA.00369-21.
3
Comparative genomics reveals broad genetic diversity, extensive recombination and nascent ecological adaptation in Micrococcus luteus.比较基因组学揭示了黄色微球菌广泛的遗传多样性、广泛的重组和新兴的生态适应性。
BMC Genomics. 2021 Feb 18;22(1):124. doi: 10.1186/s12864-021-07432-5.
4
Evaluation of CRISPR Diversity in the Human Skin Microbiome for Personal Identification.用于个体识别的人类皮肤微生物组中CRISPR多样性的评估。
mSystems. 2021 Feb 2;6(1):e01255-20. doi: 10.1128/mSystems.01255-20.
5
Draft Genome Sequences of Micrococcus luteus MFP06 and MFP07, Isolated from the Skin of Healthy Volunteers.从健康志愿者皮肤分离的藤黄微球菌MFP06和MFP07的基因组序列草图
Microbiol Resour Announc. 2020 Jun 18;9(25):e00545-20. doi: 10.1128/MRA.00545-20.

本文引用的文献

1
Taxonomy, Physiology, and Natural Products of Actinobacteria.放线菌的分类学、生理学与天然产物
Microbiol Mol Biol Rev. 2015 Nov 25;80(1):1-43. doi: 10.1128/MMBR.00019-15. Print 2016 Mar.
2
Microbial species delineation using whole genome sequences.利用全基因组序列进行微生物物种划分。
Nucleic Acids Res. 2015 Aug 18;43(14):6761-71. doi: 10.1093/nar/gkv657. Epub 2015 Jul 6.
3
RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.RASTtk:一种用于构建定制注释管道和批量注释基因组的RAST算法的模块化可扩展实现。
Sci Rep. 2015 Feb 10;5:8365. doi: 10.1038/srep08365.
4
Prokka: rapid prokaryotic genome annotation.Prokka:快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
5
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).SEED 与利用子系统技术进行快速微生物基因组注释(RAST)。
Nucleic Acids Res. 2014 Jan;42(Database issue):D206-14. doi: 10.1093/nar/gkt1226. Epub 2013 Nov 29.
6
Ecology of food microorganisms.食品微生物生态学。
Microb Ecol. 1986 Mar;12(1):15-30. doi: 10.1007/BF02153219.
7
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.非杂交、基于长读长 SMRT 测序数据的完成微生物基因组组装。
Nat Methods. 2013 Jun;10(6):563-9. doi: 10.1038/nmeth.2474. Epub 2013 May 5.
8
A phylum-level bacterial phylogenetic marker database.一门细菌系统发育标志数据库。
Mol Biol Evol. 2013 Jun;30(6):1258-62. doi: 10.1093/molbev/mst059. Epub 2013 Mar 21.
9
Genome sequence of the Fleming strain of Micrococcus luteus, a simple free-living actinobacterium.微球菌弗莱明菌株基因组序列,一种简单的自由生活放线菌。
J Bacteriol. 2010 Feb;192(3):841-60. doi: 10.1128/JB.01254-09. Epub 2009 Nov 30.
10
The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.