Materials and Process Simulation Center, California Institute of Technology, Pasadena, California 91125, USA.
J Chem Phys. 2019 Oct 21;151(15):154111. doi: 10.1063/1.5113811.
Molecular dynamics simulations require accurate force fields (FFs) to describe the physical and chemical properties of complex materials and systems. FF parameters for valence interactions can be determined from high-quality Quantum Mechanical (QM) calculations. However, it has been challenging to extract long-range nonbonded interaction potentials from QM calculations since there is no unambiguous method to separate the total QM energy into electrostatics (polarization), van der Waals (vdW), and other components. Here, we propose to use density functional theory with dispersion corrections to obtain the equation of state for single element solid systems (of H, C, N, O, F, Cl, Br, I, P, He, Ne, Ar, Kr, Xe, and Rn) from which we obtain the pure 2-body vdW nonbonded potentials. Recently, we developed the polarizable charge equilibration (PQEq) model based on QM polarization energy of electric probe dipoles with no contributions from vdW. Together, the vdW and PQEq interactions form the nonbonded potential of our new transferrable reactive FF (RexPoN). They may also be useful to replace the nonbonded parts of standard FFs, such as OPLS, Amber, UFF, and CHARMM. We find that the individual 2-body vdW potential curves can be scaled to a universal vdW potential using just three specific atomic parameters. This simplifies extension to the rest of the periodic table for atoms that do not exhibit molecular packing. We validate the accuracy of these nonbonded interactions for liquid water, energetic, and biological systems. In all cases, we find that our new nonbonded potentials provide good agreement with QM and experimental data.
分子动力学模拟需要精确的力场(FF)来描述复杂材料和系统的物理和化学性质。价相互作用的 FF 参数可以从高质量的量子力学(QM)计算中确定。然而,从 QM 计算中提取长程非键相互作用势一直具有挑战性,因为没有明确的方法将总 QM 能量分离为静电(极化)、范德华(vdW)和其他成分。在这里,我们建议使用带有色散校正的密度泛函理论从单元素固体系统(H、C、N、O、F、Cl、Br、I、P、He、Ne、Ar、Kr、Xe 和 Rn)获得状态方程,从中我们获得纯 2 体 vdW 非键势。最近,我们基于电探针偶极子的 QM 极化能开发了可极化电荷平衡(PQEq)模型,没有 vdW 的贡献。vdW 和 PQEq 相互作用共同构成了我们新的可转移反应性 FF(RexPoN)的非键势。它们也可能有助于取代标准 FF(如 OPLS、Amber、UFF 和 CHARMM)的非键部分。我们发现,可以使用仅三个特定原子参数将单个 2 体 vdW 势曲线缩放为通用 vdW 势。这简化了对不表现出分子堆积的其余元素周期表的扩展。我们验证了这些非键相互作用在液体水、高能和生物系统中的准确性。在所有情况下,我们发现我们的新非键势都与 QM 和实验数据很好地吻合。